Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   KNN_RS07690 Genome accession   NZ_AP014864
Coordinates   1438006..1438800 (+) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1433006..1443800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNN_RS07675 (KNN_01593) argR 1433845..1434294 (+) 450 WP_001032580.1 arginine repressor ArgR -
  KNN_RS07680 (KNN_01594) recN 1434559..1436298 (+) 1740 WP_000947768.1 DNA repair protein RecN Machinery gene
  KNN_RS07685 (KNN_01595) spoIVB 1436417..1437715 (+) 1299 WP_002000940.1 SpoIVB peptidase -
  KNN_RS07690 (KNN_01596) spo0A 1438006..1438800 (+) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  KNN_RS07695 (KNN_01598) - 1439054..1439617 (+) 564 WP_000428237.1 PRK06770 family protein -
  KNN_RS07700 (KNN_01599) - 1439860..1440006 (-) 147 WP_001247671.1 YycC family protein -
  KNN_RS07705 (KNN_01600) - 1440057..1440785 (+) 729 WP_000172575.1 glycerophosphodiester phosphodiesterase -
  KNN_RS07710 (KNN_01601) - 1440835..1441068 (-) 234 WP_001190211.1 DUF2627 domain-containing protein -
  KNN_RS07715 (KNN_01602) - 1441206..1443278 (+) 2073 WP_060851772.1 sigma-54-dependent Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=67177 KNN_RS07690 WP_011110369.1 1438006..1438800(+) (spo0A) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=67177 KNN_RS07690 WP_011110369.1 1438006..1438800(+) (spo0A) [Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GCCACGCGATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment