Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OIE76_RS18435 Genome accession   NZ_CP109163
Coordinates   4110673..4111797 (+) Length   374 a.a.
NCBI ID   WP_030972387.1    Uniprot ID   A0ABV2U8C8
Organism   Streptomyces sp. NBC_01727     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4105673..4116797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE76_RS18420 (OIE76_18455) - 4106263..4107132 (+) 870 WP_327125565.1 hypothetical protein -
  OIE76_RS18425 (OIE76_18460) - 4107164..4108939 (-) 1776 WP_327125566.1 hypothetical protein -
  OIE76_RS18430 (OIE76_18465) radA/sms 4109180..4110592 (+) 1413 WP_327125567.1 DNA repair protein RadA Machinery gene
  OIE76_RS18435 (OIE76_18470) disA 4110673..4111797 (+) 1125 WP_030972387.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIE76_RS18440 (OIE76_18475) - 4112006..4112815 (-) 810 WP_327125568.1 hypothetical protein -
  OIE76_RS18445 (OIE76_18480) - 4113679..4114578 (+) 900 WP_327125569.1 A/G-specific adenine glycosylase -
  OIE76_RS18450 (OIE76_18485) - 4114755..4115405 (+) 651 WP_327125570.1 SigE family RNA polymerase sigma factor -
  OIE76_RS18455 (OIE76_18490) - 4115471..4116082 (+) 612 WP_327129092.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40389.30 Da        Isoelectric Point: 4.8644

>NTDB_id=671722 OIE76_RS18435 WP_030972387.1 4110673..4111797(+) (disA) [Streptomyces sp. NBC_01727]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=671722 OIE76_RS18435 WP_030972387.1 4110673..4111797(+) (disA) [Streptomyces sp. NBC_01727]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCGAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTGCAACTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAGGCAGTGCAATTTCCCGG
TCGTCTCGGTCTCACAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAACGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGGGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCGCAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCGGAATACGTGGTGGAACTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGGGAACTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCCAAACGGTCGCGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGGGCTCTCGCACACCGAGCTGCTCGAACTGCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCGCCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCACGGGCGCGCAGCGTGCGCGAAGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTTGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433