Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA19_RS04355 Genome accession   NZ_CP094741
Coordinates   934008..935051 (+) Length   347 a.a.
NCBI ID   WP_037575781.1    Uniprot ID   A0AAE5T1E1
Organism   Staphylococcus chromogenes strain IVB6200     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 929008..940051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA19_RS04330 (MUA19_04315) - 929944..930672 (+) 729 WP_262617354.1 type 1 glutamine amidotransferase -
  MUA19_RS04335 (MUA19_04320) - 930711..931721 (-) 1011 WP_262617357.1 aromatic acid exporter family protein -
  MUA19_RS04340 (MUA19_04325) map 932054..932812 (+) 759 WP_105986696.1 type I methionyl aminopeptidase -
  MUA19_RS04345 (MUA19_04330) - 932908..933297 (+) 390 WP_262617359.1 hypothetical protein -
  MUA19_RS04350 (MUA19_04335) liaF 933310..934011 (+) 702 WP_105986698.1 cell wall-active antibiotics response protein LiaF -
  MUA19_RS04355 (MUA19_04340) vraS 934008..935051 (+) 1044 WP_037575781.1 sensor histidine kinase Regulator
  MUA19_RS04360 (MUA19_04345) vraR 935041..935670 (+) 630 WP_262617360.1 response regulator transcription factor Regulator
  MUA19_RS04365 (MUA19_04350) - 935889..936461 (-) 573 WP_262617362.1 carbonic anhydrase -
  MUA19_RS04370 (MUA19_04355) - 936504..937772 (-) 1269 WP_105986700.1 YihY/virulence factor BrkB family protein -
  MUA19_RS04375 (MUA19_04360) - 937898..938173 (-) 276 WP_262617363.1 YtxH domain-containing protein -
  MUA19_RS04380 (MUA19_04365) - 938178..938636 (-) 459 WP_145400676.1 low molecular weight protein-tyrosine-phosphatase -
  MUA19_RS04385 (MUA19_04370) - 938769..938978 (+) 210 WP_037575795.1 DUF1128 domain-containing protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39847.71 Da        Isoelectric Point: 4.8537

>NTDB_id=671720 MUA19_RS04355 WP_037575781.1 934008..935051(+) (vraS) [Staphylococcus chromogenes strain IVB6200]
MNQYVRSIGSMLILVYSLFTAFFFIDNVFTNIIFFQGMFYTQIFGVPVFLFLNLIAIFLCIIVGSVLAYKNNQQNDWLKA
QIERSIEGETVGVNDQQIELYHETLELYEALVPLNQELHRMRIKTQNLTNESYNMNDSKVQKIIEDERHRLARELHDSVS
QQLFAASMMLSAIKETPLEPPLSQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDRSLGEGIQSLVSDLQRKVPLNVVQDI
GEFDVPKGMEDHLFRITQEAISNTLRHSKGTEVTVELLQRDDYILLRIQDDGIGFNVDDKMEQSYGLKNMRERAMEIGAT
FHIVSLPDSGTRIEVKAPLDKEGHNDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=671720 MUA19_RS04355 WP_037575781.1 934008..935051(+) (vraS) [Staphylococcus chromogenes strain IVB6200]
ATGAATCAATATGTACGATCGATCGGTTCAATGCTCATTTTAGTGTATAGTCTCTTTACCGCTTTTTTCTTTATTGATAA
TGTCTTCACAAATATCATCTTTTTTCAAGGGATGTTTTATACACAAATTTTTGGGGTCCCTGTTTTCTTGTTTTTAAATT
TAATCGCCATTTTTTTATGTATTATCGTTGGGAGTGTGCTCGCTTATAAAAATAATCAACAAAATGATTGGTTAAAAGCG
CAAATTGAACGCTCAATTGAAGGTGAGACGGTAGGTGTAAATGATCAACAAATTGAACTTTATCACGAAACATTAGAATT
ATACGAGGCACTTGTGCCGCTTAATCAAGAACTTCACCGTATGCGCATTAAAACACAAAATTTAACAAATGAATCGTATA
ACATGAATGATTCAAAAGTTCAAAAAATCATTGAAGATGAGCGACACAGGTTGGCGCGTGAATTGCATGATAGTGTCTCT
CAACAGCTATTTGCGGCAAGTATGATGTTATCAGCAATAAAGGAAACACCACTTGAGCCTCCGTTGAGCCAACAAATACC
CACTTTAGAGAAAATGGTACAGGATTCGCAATTAGAAATGCGTGCGTTACTTCTGCATCTGAGACCGATTGGCTTAAAAG
ATCGTTCTTTAGGTGAAGGGATACAGTCTTTAGTATCAGATTTACAACGTAAAGTGCCATTAAATGTAGTTCAAGATATT
GGGGAATTTGACGTTCCTAAAGGGATGGAAGATCACCTCTTCAGAATTACACAAGAGGCAATTTCAAATACCCTACGTCA
TTCAAAAGGCACAGAGGTAACCGTTGAATTACTTCAGCGTGACGATTACATACTCTTACGTATACAAGATGATGGTATAG
GGTTTAACGTTGATGATAAGATGGAACAAAGTTATGGTTTGAAGAATATGCGTGAACGTGCGATGGAAATCGGTGCGACG
TTCCATATTGTATCGTTACCAGATTCAGGTACACGTATCGAAGTGAAAGCACCGTTAGATAAGGAGGGGCATAATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

81.268

100

0.813