Detailed information NTG0671476

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA26_RS15345
• Genome accession: NZ_CP109136
• Coordinates: 3316663..3317961 (-)
• Length: 432 a.a.
• NCBI ID: WP_030970081.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01751
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3311663..3322961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA26_RS15335 (OHA26_15340)	-	3312843..3315464 (-)	2622	WP_326630376.1	valine--tRNA ligase	-
OHA26_RS15340 (OHA26_15345)	-	3315603..3316586 (+)	984	WP_326817091.1	hypothetical protein	-
OHA26_RS15345 (OHA26_15350)	clpX	3316663..3317961 (-)	1299	WP_030970081.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA26_RS15350 (OHA26_15355)	clpP	3318119..3318802 (-)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA26_RS15355 (OHA26_15360)	-	3318850..3319455 (-)	606	WP_267008104.1	ATP-dependent Clp protease proteolytic subunit	-
OHA26_RS15360 (OHA26_15365)	tig	3319720..3321108 (-)	1389	WP_326630372.1	trigger factor	-
OHA26_RS15375 (OHA26_15380)	-	3321646..3321840 (-)	195	WP_136325240.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47284.11 Da
• Isoelectric Point: 4.8824

>NTDB_id=671476 OHA26_RS15345 WP_030970081.1 3316663..3317961(-) (clpX) [Streptomyces sp. NBC_01751]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENAGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=671476 OHA26_RS15345 WP_030970081.1 3316663..3317961(-) (clpX) [Streptomyces sp. NBC_01751]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGCCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAGGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTTC
GCGCCATCATGGAGGAAGTTCTGCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509