Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA58_RS06085 | Genome accession | NZ_CP094729 |
| Coordinates | 1282817..1283791 (+) | Length | 324 a.a. |
| NCBI ID | WP_002446534.1 | Uniprot ID | - |
| Organism | Staphylococcus epidermidis strain IVB6210 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1277817..1288791
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA58_RS06050 (MUA58_06045) | rpmG | 1278299..1278448 (+) | 150 | WP_001830957.1 | 50S ribosomal protein L33 | - |
| MUA58_RS06055 (MUA58_06050) | - | 1278629..1279180 (+) | 552 | WP_002446539.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MUA58_RS06060 (MUA58_06055) | - | 1279181..1280641 (+) | 1461 | WP_002457727.1 | rhomboid family intramembrane serine protease | - |
| MUA58_RS06065 (MUA58_06060) | - | 1280625..1280825 (+) | 201 | WP_002446537.1 | YqgQ family protein | - |
| MUA58_RS06070 (MUA58_06065) | - | 1280825..1281811 (+) | 987 | WP_002446536.1 | ROK family glucokinase | - |
| MUA58_RS06075 (MUA58_06070) | - | 1281811..1282137 (+) | 327 | WP_001831234.1 | MTH1187 family thiamine-binding protein | - |
| MUA58_RS06080 (MUA58_06075) | - | 1282137..1282760 (+) | 624 | WP_262614732.1 | MBL fold metallo-hydrolase | - |
| MUA58_RS06085 (MUA58_06080) | comGA | 1282817..1283791 (+) | 975 | WP_002446534.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA58_RS06090 (MUA58_06085) | comGB | 1283763..1284830 (+) | 1068 | WP_002457726.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| MUA58_RS06095 (MUA58_06090) | comGC | 1284848..1285165 (+) | 318 | WP_002446532.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA58_RS06100 (MUA58_06095) | comGD | 1285155..1285592 (+) | 438 | WP_002446531.1 | competence type IV pilus minor pilin ComGD | - |
| MUA58_RS06105 (MUA58_06100) | - | 1285579..1285872 (+) | 294 | WP_002446530.1 | hypothetical protein | - |
| MUA58_RS06110 (MUA58_06105) | - | 1285796..1286287 (+) | 492 | WP_002457724.1 | competence type IV pilus minor pilin ComGF | - |
| MUA58_RS06115 (MUA58_06110) | - | 1286452..1286964 (+) | 513 | WP_002457723.1 | shikimate kinase | - |
| MUA58_RS06120 (MUA58_06115) | gcvT | 1287182..1288273 (+) | 1092 | WP_002457722.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37261.33 Da Isoelectric Point: 8.8257
>NTDB_id=671465 MUA58_RS06085 WP_002446534.1 1282817..1283791(+) (comGA) [Staphylococcus epidermidis strain IVB6210]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDTLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KRLYYLRISTLPLSLGNESCVIRIVPQYFQTKRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQNLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNTRQLVSELMFQSQINYFFEHNHSLPKNFTKLSTHLNKMSKEGVICEEVV
DKYI
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDTLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KRLYYLRISTLPLSLGNESCVIRIVPQYFQTKRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQNLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNTRQLVSELMFQSQINYFFEHNHSLPKNFTKLSTHLNKMSKEGVICEEVV
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=671465 MUA58_RS06085 WP_002446534.1 1282817..1283791(+) (comGA) [Staphylococcus epidermidis strain IVB6210]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATACACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGGTTAGATGTATCAACACAGCATAGGGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCGTTTATATTATTTAAGAATCTCTACATTACCGTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTAAACGAGAATCATATGAATTTAAAGATTTTAAACATTTCATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGGCCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAATTTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTAGAACAAATACTCAATGGAATCACACAAATATCAGTTAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCGGACGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGTGGACATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCATTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATACTCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATCAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTATCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATACACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGGTTAGATGTATCAACACAGCATAGGGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCGTTTATATTATTTAAGAATCTCTACATTACCGTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTAAACGAGAATCATATGAATTTAAAGATTTTAAACATTTCATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGGCCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAATTTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTAGAACAAATACTCAATGGAATCACACAAATATCAGTTAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCGGACGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGTGGACATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCATTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATACTCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATCAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTATCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.062 |
100 |
0.701 |
| comGA | Staphylococcus aureus N315 |
70.062 |
100 |
0.701 |