Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | MUA98_RS07595 | Genome accession | NZ_CP094728 |
| Coordinates | 1622775..1623647 (-) | Length | 290 a.a. |
| NCBI ID | WP_002484839.1 | Uniprot ID | A0A4Y7VXK4 |
| Organism | Staphylococcus epidermidis strain IVB6213 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1584315..1655189 | 1622775..1623647 | within | 0 |
Gene organization within MGE regions
Location: 1584315..1655189
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA98_RS07450 (MUA98_07425) | yfmF | 1585355..1586626 (-) | 1272 | WP_262625490.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| MUA98_RS07455 (MUA98_07430) | - | 1586657..1587370 (-) | 714 | WP_002439536.1 | GntR family transcriptional regulator | - |
| MUA98_RS07460 (MUA98_07435) | - | 1587373..1589766 (-) | 2394 | WP_002439534.1 | DNA translocase FtsK | - |
| MUA98_RS07465 (MUA98_07440) | rnjB | 1590032..1591705 (-) | 1674 | WP_002457357.1 | ribonuclease J2 | - |
| MUA98_RS07470 (MUA98_07445) | pnp | 1592073..1594178 (-) | 2106 | WP_001832554.1 | polyribonucleotide nucleotidyltransferase | - |
| MUA98_RS07475 (MUA98_07450) | rpsO | 1594310..1594579 (-) | 270 | WP_002439528.1 | 30S ribosomal protein S15 | - |
| MUA98_RS07480 (MUA98_07455) | - | 1594699..1595670 (-) | 972 | WP_001832563.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| MUA98_RS07485 (MUA98_07460) | truB | 1595686..1596603 (-) | 918 | WP_002456563.1 | tRNA pseudouridine(55) synthase TruB | - |
| MUA98_RS07490 (MUA98_07465) | rbfA | 1596741..1597091 (-) | 351 | WP_001829509.1 | 30S ribosome-binding factor RbfA | - |
| MUA98_RS07495 (MUA98_07470) | infB | 1597394..1599556 (-) | 2163 | WP_002468903.1 | translation initiation factor IF-2 | - |
| MUA98_RS07500 (MUA98_07475) | - | 1599561..1599878 (-) | 318 | WP_002439520.1 | YlxQ family RNA-binding protein | - |
| MUA98_RS07505 (MUA98_07480) | rnpM | 1599878..1600162 (-) | 285 | WP_001829465.1 | RNase P modulator RnpM | - |
| MUA98_RS07510 (MUA98_07485) | nusA | 1600180..1601403 (-) | 1224 | WP_002456565.1 | transcription termination factor NusA | - |
| MUA98_RS07515 (MUA98_07490) | rimP | 1601424..1601891 (-) | 468 | WP_002439519.1 | ribosome maturation factor RimP | - |
| MUA98_RS07520 (MUA98_07495) | - | 1602070..1606380 (-) | 4311 | WP_002456566.1 | PolC-type DNA polymerase III | - |
| MUA98_RS07525 (MUA98_07500) | - | 1606630..1608333 (-) | 1704 | WP_001829513.1 | proline--tRNA ligase | - |
| MUA98_RS07530 (MUA98_07505) | rseP | 1608352..1609638 (-) | 1287 | WP_001829501.1 | RIP metalloprotease RseP | - |
| MUA98_RS07535 (MUA98_07510) | - | 1609872..1610654 (-) | 783 | WP_001829499.1 | phosphatidate cytidylyltransferase | - |
| MUA98_RS07540 (MUA98_07515) | - | 1610658..1611428 (-) | 771 | WP_001832561.1 | isoprenyl transferase | - |
| MUA98_RS07545 (MUA98_07520) | frr | 1611649..1612203 (-) | 555 | WP_001829472.1 | ribosome recycling factor | - |
| MUA98_RS07550 (MUA98_07525) | pyrH | 1612220..1612942 (-) | 723 | WP_002439511.1 | UMP kinase | - |
| MUA98_RS07555 (MUA98_07530) | tsf | 1613083..1613961 (-) | 879 | WP_002439509.1 | translation elongation factor Ts | - |
| MUA98_RS07560 (MUA98_07535) | rpsB | 1614113..1614901 (-) | 789 | WP_001832557.1 | 30S ribosomal protein S2 | - |
| MUA98_RS07565 (MUA98_07540) | codY | 1615264..1616034 (-) | 771 | WP_002439506.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| MUA98_RS07570 (MUA98_07545) | hslU | 1616058..1617461 (-) | 1404 | WP_001829474.1 | ATP-dependent protease ATPase subunit HslU | - |
| MUA98_RS07575 (MUA98_07550) | hslV | 1617530..1618072 (-) | 543 | WP_001829498.1 | ATP-dependent protease subunit HslV | - |
| MUA98_RS07580 (MUA98_07555) | xerC | 1618076..1618936 (-) | 861 | WP_002439503.1 | tyrosine recombinase XerC | - |
| MUA98_RS07585 (MUA98_07560) | trmFO | 1619191..1620498 (-) | 1308 | WP_001832560.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| MUA98_RS07590 (MUA98_07565) | topA | 1620523..1622592 (-) | 2070 | WP_001829508.1 | type I DNA topoisomerase | - |
| MUA98_RS07595 (MUA98_07570) | dprA | 1622775..1623647 (-) | 873 | WP_002484839.1 | DNA-processing protein DprA | Machinery gene |
| MUA98_RS07605 (MUA98_07580) | sucD | 1624452..1625360 (-) | 909 | WP_002446283.1 | succinate--CoA ligase subunit alpha | - |
| MUA98_RS07610 (MUA98_07585) | sucC | 1625382..1626548 (-) | 1167 | WP_002439496.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| MUA98_RS07615 (MUA98_07590) | - | 1626656..1627426 (-) | 771 | WP_001829514.1 | ribonuclease HII | - |
| MUA98_RS07620 (MUA98_07595) | ylqF | 1627431..1628294 (-) | 864 | WP_002468554.1 | ribosome biogenesis GTPase YlqF | - |
| MUA98_RS07625 (MUA98_07600) | - | 1628623..1631223 (+) | 2601 | WP_010959172.1 | YfhO family protein | - |
| MUA98_RS07630 (MUA98_07605) | - | 1631216..1633819 (+) | 2604 | WP_020368058.1 | YfhO family protein | - |
| MUA98_RS07635 (MUA98_07610) | rplS | 1634349..1634699 (-) | 351 | WP_002436293.1 | 50S ribosomal protein L19 | - |
| MUA98_RS07640 (MUA98_07615) | trmD | 1634805..1635542 (-) | 738 | WP_001829466.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| MUA98_RS07645 (MUA98_07620) | rimM | 1635542..1636045 (-) | 504 | WP_001832559.1 | ribosome maturation factor RimM | - |
| MUA98_RS07650 (MUA98_07625) | rpsP | 1636172..1636447 (-) | 276 | WP_002439483.1 | 30S ribosomal protein S16 | - |
| MUA98_RS07655 (MUA98_07630) | ffh | 1636755..1638122 (-) | 1368 | WP_001830113.1 | signal recognition particle protein | - |
| MUA98_RS07660 (MUA98_07635) | - | 1638153..1638485 (-) | 333 | WP_002457379.1 | putative DNA-binding protein | - |
| MUA98_RS07665 (MUA98_07640) | ftsY | 1638487..1639713 (-) | 1227 | WP_001830080.1 | signal recognition particle-docking protein FtsY | - |
| MUA98_RS07670 (MUA98_07645) | smc | 1639710..1643279 (-) | 3570 | WP_002502436.1 | chromosome segregation protein SMC | - |
| MUA98_RS07675 (MUA98_07650) | rnc | 1643406..1644143 (-) | 738 | WP_002470220.1 | ribonuclease III | - |
| MUA98_RS07680 (MUA98_07655) | - | 1644258..1644491 (-) | 234 | WP_001830184.1 | acyl carrier protein | - |
| MUA98_RS07685 (MUA98_07660) | fabG | 1644718..1645452 (-) | 735 | WP_001830161.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| MUA98_RS07690 (MUA98_07665) | fabD | 1645445..1646371 (-) | 927 | WP_001830062.1 | ACP S-malonyltransferase | - |
| MUA98_RS07695 (MUA98_07670) | plsX | 1646373..1647350 (-) | 978 | WP_001830112.1 | phosphate acyltransferase PlsX | - |
| MUA98_RS07700 (MUA98_07675) | fapR | 1647352..1647912 (-) | 561 | WP_001830099.1 | transcription factor FapR | - |
| MUA98_RS07705 (MUA98_07680) | recG | 1648071..1650119 (-) | 2049 | WP_020368084.1 | ATP-dependent DNA helicase RecG | - |
| MUA98_RS07710 (MUA98_07685) | fakA | 1650323..1651981 (-) | 1659 | WP_002489351.1 | fatty acid kinase catalytic subunit FakA | - |
| MUA98_RS07715 (MUA98_07690) | - | 1651996..1652370 (-) | 375 | WP_001830156.1 | Asp23/Gls24 family envelope stress response protein | - |
| MUA98_RS07720 (MUA98_07695) | rpmB | 1652728..1652916 (+) | 189 | WP_001830107.1 | 50S ribosomal protein L28 | - |
| MUA98_RS07725 (MUA98_07700) | - | 1652999..1653634 (-) | 636 | WP_002489340.1 | thiamine diphosphokinase | - |
| MUA98_RS07730 (MUA98_07705) | rpe | 1653639..1654283 (-) | 645 | WP_001830173.1 | ribulose-phosphate 3-epimerase | - |
| MUA98_RS07735 (MUA98_07710) | rsgA | 1654284..1655159 (-) | 876 | WP_002456227.1 | ribosome small subunit-dependent GTPase A | - |
Sequence
Protein
Download Length: 290 a.a. Molecular weight: 33717.61 Da Isoelectric Point: 9.3616
>NTDB_id=671438 MUA98_RS07595 WP_002484839.1 1622775..1623647(-) (dprA) [Staphylococcus epidermidis strain IVB6213]
MIQQTMLKLYWANFTTAQLHHLTSTYPDFLSENVFHQHDMIKRWLTERNSERLWNKYERFKELKLMDIIKEMKKANVSFT
TYFDDNYPSLCKEMYDYPYVIFYKGNPQFFNHSHSLAVIGSRNATQYTSQSLNYLFPSFRQLNMAIVSGLARGADSVAHQ
TALKYLLPTIGVLGFGHCYHYPKATLNLRTKVERNGLVISEYPPFSPISKHKFPERNRLISGLSRGVLITEAEERSGSQI
TIDCALEQNRNVYVLPGSMFNKMTKGNLRRINEGAQVVIDESSILYDYLF
MIQQTMLKLYWANFTTAQLHHLTSTYPDFLSENVFHQHDMIKRWLTERNSERLWNKYERFKELKLMDIIKEMKKANVSFT
TYFDDNYPSLCKEMYDYPYVIFYKGNPQFFNHSHSLAVIGSRNATQYTSQSLNYLFPSFRQLNMAIVSGLARGADSVAHQ
TALKYLLPTIGVLGFGHCYHYPKATLNLRTKVERNGLVISEYPPFSPISKHKFPERNRLISGLSRGVLITEAEERSGSQI
TIDCALEQNRNVYVLPGSMFNKMTKGNLRRINEGAQVVIDESSILYDYLF
Nucleotide
Download Length: 873 bp
>NTDB_id=671438 MUA98_RS07595 WP_002484839.1 1622775..1623647(-) (dprA) [Staphylococcus epidermidis strain IVB6213]
TTGATACAACAGACGATGTTAAAACTATATTGGGCAAATTTCACTACGGCACAACTTCATCATCTTACAAGTACATATCC
TGACTTTCTATCAGAAAACGTATTTCATCAACATGACATGATAAAAAGGTGGCTTACAGAGCGTAATTCTGAAAGGCTAT
GGAACAAATATGAACGTTTCAAAGAATTAAAGCTGATGGACATTATTAAAGAAATGAAAAAAGCAAATGTTAGTTTTACA
ACATACTTTGATGATAACTACCCTTCTCTTTGCAAAGAAATGTATGATTATCCTTATGTGATATTCTACAAAGGAAATCC
ACAGTTCTTTAATCATTCTCACTCTTTAGCTGTAATTGGCTCACGTAATGCCACACAATATACAAGTCAATCTTTAAACT
ATCTTTTTCCTTCATTTAGACAATTAAATATGGCGATTGTTTCTGGATTAGCGCGCGGTGCAGATAGTGTAGCACATCAA
ACCGCACTTAAATACCTATTACCAACTATTGGCGTACTTGGATTTGGCCATTGTTATCATTATCCTAAAGCAACCTTAAA
TTTAAGAACTAAAGTTGAAAGGAATGGCTTAGTGATAAGTGAATATCCACCATTTTCTCCTATAAGTAAGCATAAATTTC
CTGAAAGAAACAGGCTTATAAGTGGTCTGTCCAGAGGGGTACTTATAACTGAGGCTGAAGAAAGAAGTGGTAGTCAAATC
ACTATCGATTGTGCTTTAGAGCAAAATAGAAATGTTTATGTTCTACCTGGTTCAATGTTCAACAAAATGACTAAAGGTAA
TTTAAGAAGGATAAATGAAGGTGCTCAAGTTGTTATAGATGAAAGTAGTATATTATATGATTATCTATTTTAG
TTGATACAACAGACGATGTTAAAACTATATTGGGCAAATTTCACTACGGCACAACTTCATCATCTTACAAGTACATATCC
TGACTTTCTATCAGAAAACGTATTTCATCAACATGACATGATAAAAAGGTGGCTTACAGAGCGTAATTCTGAAAGGCTAT
GGAACAAATATGAACGTTTCAAAGAATTAAAGCTGATGGACATTATTAAAGAAATGAAAAAAGCAAATGTTAGTTTTACA
ACATACTTTGATGATAACTACCCTTCTCTTTGCAAAGAAATGTATGATTATCCTTATGTGATATTCTACAAAGGAAATCC
ACAGTTCTTTAATCATTCTCACTCTTTAGCTGTAATTGGCTCACGTAATGCCACACAATATACAAGTCAATCTTTAAACT
ATCTTTTTCCTTCATTTAGACAATTAAATATGGCGATTGTTTCTGGATTAGCGCGCGGTGCAGATAGTGTAGCACATCAA
ACCGCACTTAAATACCTATTACCAACTATTGGCGTACTTGGATTTGGCCATTGTTATCATTATCCTAAAGCAACCTTAAA
TTTAAGAACTAAAGTTGAAAGGAATGGCTTAGTGATAAGTGAATATCCACCATTTTCTCCTATAAGTAAGCATAAATTTC
CTGAAAGAAACAGGCTTATAAGTGGTCTGTCCAGAGGGGTACTTATAACTGAGGCTGAAGAAAGAAGTGGTAGTCAAATC
ACTATCGATTGTGCTTTAGAGCAAAATAGAAATGTTTATGTTCTACCTGGTTCAATGTTCAACAAAATGACTAAAGGTAA
TTTAAGAAGGATAAATGAAGGTGCTCAAGTTGTTATAGATGAAAGTAGTATATTATATGATTATCTATTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Staphylococcus aureus MW2 |
56.944 |
99.31 |
0.566 |
| dprA | Staphylococcus aureus N315 |
56.944 |
99.31 |
0.566 |