Detailed information NTG0067141

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R30_RS21705
• Genome accession: NZ_AP022245
• Coordinates: 4463603..4464628 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WP8-S18-CRE-02
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4458603..4469628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R30_RS21695 (WP8S18C02_42330)	rpmE	4460834..4461046 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R30_RS21700 (WP8S18C02_42340)	priA	4461249..4463447 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
H7R30_RS21705 (WP8S18C02_42350)	cytR	4463603..4464628 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H7R30_RS21710 (WP8S18C02_42360)	ftsN	4464720..4465679 (+)	960	WP_000068828.1	cell division protein FtsN	-
H7R30_RS21715 (WP8S18C02_42370)	hslV	4465772..4466302 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R30_RS21720 (WP8S18C02_42380)	hslU	4466312..4467643 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
H7R30_RS21725 (WP8S18C02_42390)	menA	4467710..4468636 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R30_RS21730 (WP8S18C02_42400)	rraA	4468729..4469214 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R30_RS21735 (WP8S18C02_42410)	zapB	4469299..4469544 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=67141 H7R30_RS21705 WP_000644904.1 4463603..4464628(+) (cytR) [Escherichia coli strain WP8-S18-CRE-02]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=67141 H7R30_RS21705 WP_000644904.1 4463603..4464628(+) (cytR) [Escherichia coli strain WP8-S18-CRE-02]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628