Detailed information NTG0671403

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG909_RS09150
• Genome accession: NZ_CP109132
• Coordinates: 2264947..2266245 (-)
• Length: 432 a.a.
• NCBI ID: WP_326697480.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01754
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2259947..2271245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG909_RS09140 (OG909_09135)	-	2261080..2263701 (-)	2622	WP_326697478.1	valine--tRNA ligase	-
OG909_RS09145 (OG909_09140)	-	2263840..2264883 (+)	1044	WP_326697479.1	hypothetical protein	-
OG909_RS09150 (OG909_09145)	clpX	2264947..2266245 (-)	1299	WP_326697480.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG909_RS09155 (OG909_09150)	clpP	2266400..2267083 (-)	684	WP_326697481.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG909_RS09160 (OG909_09155)	-	2267167..2267772 (-)	606	WP_326701611.1	ATP-dependent Clp protease proteolytic subunit	-
OG909_RS09165 (OG909_09160)	tig	2268057..2269475 (-)	1419	WP_326697482.1	trigger factor	-
OG909_RS09180 (OG909_09175)	-	2270078..2270272 (-)	195	WP_326697483.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47347.12 Da
• Isoelectric Point: 4.8363

>NTDB_id=671403 OG909_RS09150 WP_326697480.1 2264947..2266245(-) (clpX) [Streptomyces sp. NBC_01754]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRSGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRAIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=671403 OG909_RS09150 WP_326697480.1 2264947..2266245(-) (clpX) [Streptomyces sp. NBC_01754]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCGGAGAGTT
CCGAGGTGCGGTGGGAGGAGCTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTTCAGGCCGGGGAGAACGGCGGCGGCGCGAACCG
TGACGACGCGATCGAGCTCGCCAAGTCGAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGACGTCTCCGGGGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGAAGATCATCGAGTCGCGGTCCGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGTTGCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAACGCCTGTTCGAGCTCGACGGTGT
GGAGCTGGAGTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGGCAGACGGGCGCGCGCGGGCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCGGACGTCGTCCGTGACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCGCGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.369	95.37	0.519