Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   MUA17_RS07790 Genome accession   NZ_CP094725
Coordinates   1643398..1644264 (-) Length   288 a.a.
NCBI ID   WP_262632169.1    Uniprot ID   -
Organism   Staphylococcus felis strain IVB6254     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1638398..1649264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA17_RS07775 (MUA17_07780) xerC 1638888..1639778 (-) 891 WP_167388996.1 tyrosine recombinase XerC -
  MUA17_RS07780 (MUA17_07785) trmFO 1639897..1641204 (-) 1308 WP_115856009.1 FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO -
  MUA17_RS07785 (MUA17_07790) topA 1641224..1643293 (-) 2070 WP_115856008.1 type I DNA topoisomerase -
  MUA17_RS07790 (MUA17_07795) dprA 1643398..1644264 (-) 867 WP_262632169.1 DNA-processing protein DprA Machinery gene
  MUA17_RS07795 (MUA17_07800) sucD 1644452..1645357 (-) 906 WP_103209423.1 succinate--CoA ligase subunit alpha -
  MUA17_RS07800 (MUA17_07805) sucC 1645379..1646545 (-) 1167 WP_115856006.1 ADP-forming succinate--CoA ligase subunit beta -
  MUA17_RS07805 (MUA17_07810) - 1646729..1647058 (+) 330 WP_103209426.1 nucleoside triphosphate pyrophosphohydrolase family protein -
  MUA17_RS07810 (MUA17_07815) - 1647184..1647453 (-) 270 WP_115890393.1 hypothetical protein -
  MUA17_RS07815 (MUA17_07820) - 1647569..1648351 (-) 783 WP_262632170.1 ribonuclease HII -
  MUA17_RS07820 (MUA17_07825) ylqF 1648344..1649219 (-) 876 WP_262632171.1 ribosome biogenesis GTPase YlqF -

Sequence

Protein


Download         Length: 288 a.a.        Molecular weight: 33047.32 Da        Isoelectric Point: 9.7154

>NTDB_id=671370 MUA17_RS07790 WP_262632169.1 1643398..1644264(-) (dprA) [Staphylococcus felis strain IVB6254]
MQKIFLLLLYAGFSTHQIQKIERLMPNMLNPPYAFSKFKKIRSLFNHNPAIQKKFQLLEQLNYDVILDDLRQKNIKVVDM
TSTYYPHLLKEIFDPPYVLFCKGNLQLLNHMNQTLSIVGARMHTAYTTQALEYLFPYFETKKLIIVSGLASGTDALAHQY
ALSHHLSTIGVLAFGHDHHYPQNTKHLRKQIEKMNLTVSEYPPHTPPSRYRFPERNRIISGVSKGVFVTEAKEKSGALIT
IDQALEQNRNVYVLPGTMFDTHTKGNLMRAKEGAEIVLGAADILKDYE

Nucleotide


Download         Length: 867 bp        

>NTDB_id=671370 MUA17_RS07790 WP_262632169.1 1643398..1644264(-) (dprA) [Staphylococcus felis strain IVB6254]
ATGCAAAAAATATTTCTATTATTGCTTTATGCTGGGTTCTCAACACATCAGATACAGAAAATCGAAAGGCTTATGCCGAA
TATGCTTAATCCTCCTTATGCATTTAGCAAGTTCAAAAAAATACGCTCTCTTTTTAATCATAATCCAGCTATACAGAAAA
AATTTCAACTGTTAGAACAACTAAATTATGATGTCATTCTAGACGACTTACGTCAAAAAAACATTAAAGTAGTTGACATG
ACGAGCACTTATTATCCTCATTTGTTGAAAGAAATATTTGATCCCCCCTATGTTCTTTTTTGTAAAGGAAATCTCCAATT
ATTAAACCATATGAATCAAACGTTGAGTATAGTAGGTGCTCGAATGCACACAGCCTACACAACACAAGCGTTAGAATATC
TATTTCCTTATTTTGAAACAAAAAAATTAATTATAGTGTCTGGTTTGGCCAGTGGAACAGATGCATTAGCTCATCAATAC
GCTTTATCACATCATCTATCGACAATTGGTGTTTTAGCGTTTGGACATGACCATCATTACCCACAAAATACGAAACATTT
ACGAAAGCAAATTGAAAAAATGAATTTAACCGTGAGTGAATATCCACCACATACACCACCGTCACGTTACAGGTTTCCAG
AACGTAACCGTATTATTAGTGGTGTGTCGAAAGGTGTATTTGTTACCGAGGCGAAAGAAAAAAGTGGGGCGCTTATAACG
ATTGATCAAGCATTAGAGCAAAATCGTAACGTATATGTTTTGCCAGGAACGATGTTTGACACACATACAAAAGGGAATTT
AATGCGAGCAAAAGAAGGTGCAGAAATAGTATTAGGTGCGGCTGATATTTTAAAAGATTACGAATGA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(71-277)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus N315

51.724

100

0.521
  dprA Staphylococcus aureus MW2

51.724

100

0.521