Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MUA17_RS04415 Genome accession   NZ_CP094725
Coordinates   960041..960757 (-) Length   238 a.a.
NCBI ID   WP_103207458.1    Uniprot ID   A0AAQ0HQG5
Organism   Staphylococcus felis strain IVB6254     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 955041..965757
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA17_RS04395 (MUA17_04400) - 955615..956259 (+) 645 WP_115856971.1 redox-sensing transcriptional repressor Rex -
  MUA17_RS04400 (MUA17_04405) - 956925..958001 (+) 1077 WP_115871105.1 YeeE/YedE family protein -
  MUA17_RS04405 (MUA17_04410) - 958019..958243 (+) 225 WP_103207455.1 sulfurtransferase TusA family protein -
  MUA17_RS04410 (MUA17_04415) - 958468..959952 (+) 1485 WP_262633066.1 sucrose-6-phosphate hydrolase -
  MUA17_RS04415 (MUA17_04420) agrA 960041..960757 (-) 717 WP_103207458.1 quorum-sensing response regulator AgrA Regulator
  MUA17_RS04420 (MUA17_04425) agrC 960772..962070 (-) 1299 WP_115940030.1 quorum-sensing sensor histidine kinase AgrC -
  MUA17_RS04425 (MUA17_04430) agrD 962106..962243 (-) 138 WP_103207460.1 cyclic lactone autoinducer peptide AgrD -
  MUA17_RS04430 (MUA17_04435) - 962246..962812 (-) 567 WP_103207462.1 accessory gene regulator AgrB -
  MUA17_RS04435 (MUA17_04440) - 963175..963288 (+) 114 WP_194295051.1 delta-lysin family phenol-soluble modulin -
  MUA17_RS04440 (MUA17_04445) - 963539..964345 (-) 807 WP_103209745.1 carbon-nitrogen family hydrolase -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27928.86 Da        Isoelectric Point: 4.8715

>NTDB_id=671353 MUA17_RS04415 WP_103207458.1 960041..960757(-) (agrA) [Staphylococcus felis strain IVB6254]
MKILICEDDPKQRERMQQIIENYIMIEEKPMEVEIATNDPYEILEAAKNMSDIGCYFLDIQLESDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAALDFIFKDDPDELQTRIIDCLETALKRLDLLTKDNTIETLELKRGSSSVYVNYDEVM
FFESSPKSHRLIAHLDNRQIEFYGNLKELAQLDDRFVRCHNSFVLNRHNISHVDSKERIAYFKNDEYCYVSVRNLKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=671353 MUA17_RS04415 WP_103207458.1 960041..960757(-) (agrA) [Staphylococcus felis strain IVB6254]
ATGAAAATACTGATTTGCGAAGATGATCCAAAACAACGTGAACGAATGCAACAAATTATTGAGAATTATATTATGATTGA
AGAAAAACCAATGGAAGTTGAAATTGCAACAAATGATCCATATGAAATTTTAGAAGCTGCTAAAAATATGTCAGACATTG
GCTGTTATTTTTTAGATATTCAACTTGAATCTGATATCAATGGTATTAAGTTAGGTAGTGAAATTAGAAAACATGATCCT
GTTGGAAATATTATTTTTGTAACAAGTCACAGTGAGTTAACTTATCTCACATTTGTTTACAAAGTAGCCGCACTTGACTT
TATTTTTAAAGATGATCCTGACGAATTGCAAACGCGTATTATTGATTGTTTAGAAACTGCATTAAAACGTTTAGATTTAT
TAACAAAAGACAATACCATTGAAACATTAGAGCTAAAGCGCGGTAGTAGTTCTGTTTATGTCAATTATGATGAAGTGATG
TTTTTCGAGTCCTCTCCAAAGTCTCACCGTTTAATCGCACATTTGGACAACCGTCAAATTGAATTTTATGGTAATCTCAA
GGAACTTGCACAACTTGATGACCGCTTCGTCCGTTGTCACAATAGTTTTGTTTTAAATCGACATAATATTTCACATGTCG
ACTCTAAAGAACGCATCGCTTATTTTAAAAACGACGAGTATTGTTATGTCTCTGTTCGTAATCTCAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

82.773

100

0.828
  comE/comE1 Streptococcus equinus JB1

35.802

100

0.366