Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   MUA51_RS07470 Genome accession   NZ_CP094723
Coordinates   1516026..1516655 (-) Length   209 a.a.
NCBI ID   WP_262559174.1    Uniprot ID   -
Organism   Staphylococcus sp. IVB6214     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1511026..1521655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA51_RS07440 (MUA51_07435) - 1511322..1512560 (-) 1239 WP_262559165.1 aminopeptidase -
  MUA51_RS07445 (MUA51_07440) - 1512575..1512781 (-) 207 WP_262559166.1 DUF1128 domain-containing protein -
  MUA51_RS07450 (MUA51_07445) - 1513019..1513480 (+) 462 WP_262559167.1 low molecular weight protein-tyrosine-phosphatase -
  MUA51_RS07455 (MUA51_07450) - 1513480..1513770 (+) 291 WP_262559168.1 YtxH domain-containing protein -
  MUA51_RS07460 (MUA51_07455) - 1513976..1515253 (+) 1278 WP_262559170.1 YihY/virulence factor BrkB family protein -
  MUA51_RS07465 (MUA51_07460) - 1515402..1515971 (+) 570 WP_262559172.1 carbonic anhydrase -
  MUA51_RS07470 (MUA51_07465) vraR 1516026..1516655 (-) 630 WP_262559174.1 response regulator transcription factor Regulator
  MUA51_RS07475 (MUA51_07470) vraS 1516645..1517691 (-) 1047 WP_262559176.1 sensor histidine kinase Regulator
  MUA51_RS07480 (MUA51_07475) liaF 1517688..1518392 (-) 705 WP_262559177.1 cell wall-active antibiotics response protein LiaF -
  MUA51_RS07485 (MUA51_07480) - 1518405..1518794 (-) 390 WP_262559178.1 hypothetical protein -
  MUA51_RS07490 (MUA51_07485) map 1518893..1519654 (-) 762 WP_262559179.1 type I methionyl aminopeptidase -
  MUA51_RS07495 (MUA51_07490) - 1519749..1520747 (+) 999 WP_262559180.1 aromatic acid exporter family protein -
  MUA51_RS07500 (MUA51_07495) - 1520797..1521522 (-) 726 WP_262559181.1 glutamine amidotransferase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23309.88 Da        Isoelectric Point: 4.7737

>NTDB_id=671306 MUA51_RS07470 WP_262559174.1 1516026..1516655(-) (vraR) [Staphylococcus sp. IVB6214]
MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGGSGREAIEKAHELNPDVILMDLVMTDMDGVEATAQIKKDLPGIKVV
MLTSYIEDKEVYRALDVGVDSYILKTTSASDIASAIRKTSLGESVFEAEVLVKMRNRMKQRAELYEMLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHGLIE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=671306 MUA51_RS07470 WP_262559174.1 1516026..1516655(-) (vraR) [Staphylococcus sp. IVB6214]
ATGACGATTAAAGTTTTGTTTGTAGACGATCATGAGATGGTTCGTATTGGTATTTCGAGCTATCTTTCAACACAATCAGA
TATTGAAGTTGTTGGAGAAGGCGGCTCAGGTAGAGAAGCGATTGAAAAAGCACACGAATTAAACCCAGATGTGATCTTAA
TGGATCTTGTCATGACAGATATGGATGGTGTTGAGGCAACAGCACAAATTAAAAAAGATCTGCCTGGGATAAAAGTAGTG
ATGCTGACAAGCTACATAGAGGATAAAGAAGTCTATCGTGCGTTGGACGTGGGTGTGGACAGTTATATTCTGAAAACAAC
GAGTGCGAGCGATATTGCGTCTGCAATTCGTAAAACGAGTCTTGGTGAGTCGGTATTCGAAGCGGAAGTATTAGTAAAGA
TGCGCAATCGAATGAAGCAACGTGCCGAGCTTTATGAAATGTTAACAGAACGAGAGATGGAGATTTTATTGCTGATTGCA
AAAGGGTATTCTAACCAAGAGATTGCGAGTGCATCACATATTACAATTAAAACCGTTAAAACACATGTGAGCAATATATT
GAGTAAACTAGAAGTGCAAGATCGAACACAAGCTGTCATCTATGCCTTCCAACATGGACTCATCGAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

90.431

100

0.904
  degU Bacillus subtilis subsp. subtilis str. 168

35.268

100

0.378