Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA26_RS07485 Genome accession   NZ_CP094717
Coordinates   1510201..1511244 (-) Length   347 a.a.
NCBI ID   WP_262613874.1    Uniprot ID   -
Organism   Staphylococcus sp. IVB6246     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1505201..1516244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA26_RS07455 (MUA26_07435) - 1505988..1506194 (-) 207 WP_262605142.1 DUF1128 domain-containing protein -
  MUA26_RS07460 (MUA26_07440) - 1506427..1506888 (+) 462 WP_262603536.1 low molecular weight protein-tyrosine-phosphatase -
  MUA26_RS07465 (MUA26_07445) - 1506888..1507178 (+) 291 WP_262613870.1 YtxH domain-containing protein -
  MUA26_RS07470 (MUA26_07450) - 1507360..1508658 (+) 1299 WP_262613872.1 YihY/virulence factor BrkB family protein -
  MUA26_RS07475 (MUA26_07455) - 1508953..1509531 (+) 579 WP_262603539.1 carbonic anhydrase -
  MUA26_RS07480 (MUA26_07460) vraR 1509582..1510211 (-) 630 WP_262603540.1 response regulator transcription factor Regulator
  MUA26_RS07485 (MUA26_07465) vraS 1510201..1511244 (-) 1044 WP_262613874.1 sensor histidine kinase Regulator
  MUA26_RS07490 (MUA26_07470) liaF 1511241..1511945 (-) 705 WP_262613875.1 cell wall-active antibiotics response protein LiaF -
  MUA26_RS07495 (MUA26_07475) - 1511958..1512347 (-) 390 WP_262613876.1 hypothetical protein -
  MUA26_RS07500 (MUA26_07480) map 1512446..1513207 (-) 762 WP_262603544.1 type I methionyl aminopeptidase -
  MUA26_RS07505 (MUA26_07485) - 1513302..1514300 (+) 999 WP_262603545.1 aromatic acid exporter family protein -
  MUA26_RS07510 (MUA26_07490) - 1514370..1515095 (-) 726 WP_262603546.1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40113.48 Da        Isoelectric Point: 5.6358

>NTDB_id=671112 MUA26_RS07485 WP_262613874.1 1510201..1511244(-) (vraS) [Staphylococcus sp. IVB6246]
MNHYIRTIGSMLILVYAMFTVFFFIDKVFVNIIFFQGMLYKQIFGIPVFLFLNLVVVFFCILVGSVIAYKINQQYDWLQE
QVERAMQGETVGINDHQIELYNETISLYQTLVPLNQELHKLRIKTQNLTNEQYNMNDLKVKKIIEDERQRLARELHDSVS
QQLFAASLMLSAIKETQLEPPLDQQIPTLEKMIQESQLEMRALLLHLRPIGLKDKTLGEGIKSLVTDLQRKVPMKVIYEI
DTFEVPKGIEDHLFRITQEAISNTLRHANGTQVSVELLNRDGHLLLRIQDDGIGFNPDEKMEQSYGLKNMRERATEIGAT
FHIVSLPNAGTRIEVKAPLDKEGQYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=671112 MUA26_RS07485 WP_262613874.1 1510201..1511244(-) (vraS) [Staphylococcus sp. IVB6246]
ATGAATCATTATATCCGGACGATTGGCTCTATGTTGATATTGGTTTATGCGATGTTTACCGTTTTTTTCTTTATCGATAA
AGTGTTTGTGAATATTATATTTTTTCAAGGTATGTTATATAAACAAATATTTGGGATTCCAGTATTTTTATTTCTCAACC
TTGTTGTCGTGTTTTTCTGTATTCTTGTGGGTAGTGTGATTGCTTATAAGATTAATCAGCAGTATGACTGGTTACAAGAA
CAAGTGGAACGTGCGATGCAAGGTGAAACAGTCGGTATCAATGATCATCAAATAGAATTGTATAATGAAACCATTTCACT
CTATCAAACGTTAGTACCATTGAATCAAGAATTGCATAAGTTGCGTATTAAGACGCAGAACTTAACCAATGAACAGTATA
ATATGAATGATTTAAAGGTAAAAAAGATTATTGAAGATGAACGACAACGCTTGGCACGAGAGTTGCATGACAGTGTATCA
CAACAGCTCTTTGCGGCGAGTTTGATGTTGTCGGCAATTAAAGAGACGCAACTTGAGCCACCGTTAGATCAACAGATTCC
AACGCTAGAAAAGATGATACAAGAGTCACAATTAGAGATGCGTGCGTTGCTATTGCATCTGCGTCCAATTGGCTTAAAAG
ATAAGACACTCGGTGAAGGAATTAAGTCGTTAGTGACAGATTTACAACGAAAAGTGCCGATGAAGGTAATTTATGAAATT
GATACGTTCGAAGTACCAAAAGGCATTGAAGATCACCTGTTTCGTATTACACAGGAAGCCATTTCTAATACGTTGAGACA
TGCGAATGGGACACAAGTGAGTGTGGAGTTATTAAATCGAGACGGGCATCTATTATTGCGCATACAAGATGATGGAATTG
GATTTAATCCAGATGAAAAAATGGAACAAAGTTATGGTTTAAAAAATATGAGAGAACGTGCAACAGAGATTGGCGCGACA
TTTCATATTGTATCGTTACCGAATGCAGGAACACGTATTGAAGTAAAAGCACCATTAGATAAGGAGGGGCAATATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

81.268

100

0.813