Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   MUA61_RS08725 Genome accession   NZ_CP094715
Coordinates   1795343..1795912 (-) Length   189 a.a.
NCBI ID   WP_262551539.1    Uniprot ID   -
Organism   Staphylococcus pasteuri strain IVB6198     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1790343..1800912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA61_RS08675 (MUA61_08675) - 1790633..1791184 (-) 552 WP_070452227.1 GNAT family N-acetyltransferase -
  MUA61_RS08680 (MUA61_08680) - 1791401..1791613 (+) 213 WP_017638069.1 TM2 domain-containing protein -
  MUA61_RS08685 - 1791717..1791818 (+) 102 WP_017638068.1 SAR1012 family small protein -
  MUA61_RS08690 (MUA61_08685) - 1791872..1792477 (-) 606 WP_070452231.1 FMN-binding negative transcriptional regulator -
  MUA61_RS08695 (MUA61_08690) - 1792494..1793003 (-) 510 WP_070452234.1 GNAT family N-acetyltransferase -
  MUA61_RS08700 (MUA61_08695) - 1793019..1793471 (-) 453 WP_070452237.1 MarR family winged helix-turn-helix transcriptional regulator -
  MUA61_RS08705 (MUA61_08700) - 1793774..1794130 (+) 357 WP_017638419.1 DoxX family protein -
  MUA61_RS08710 - 1794200..1794334 (+) 135 WP_256219674.1 hypothetical protein -
  MUA61_RS08725 (MUA61_08715) comK/comK1 1795343..1795912 (-) 570 WP_262551539.1 competence protein ComK Regulator
  MUA61_RS08730 (MUA61_08720) - 1796130..1796348 (+) 219 WP_017637367.1 IDEAL domain-containing protein -
  MUA61_RS08735 (MUA61_08725) - 1796427..1797413 (-) 987 WP_017637368.1 lipoate--protein ligase -
  MUA61_RS08740 (MUA61_08730) - 1797617..1797802 (+) 186 WP_002450747.1 DUF2187 family protein -
  MUA61_RS08745 (MUA61_08735) - 1797808..1798410 (+) 603 WP_017637369.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  MUA61_RS08750 (MUA61_08740) - 1798567..1800075 (-) 1509 WP_017637370.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22455.71 Da        Isoelectric Point: 9.4950

>NTDB_id=671074 MUA61_RS08725 WP_262551539.1 1795343..1795912(-) (comK/comK1) [Staphylococcus pasteuri strain IVB6198]
MTTQSIYVIRKGDMVIRPNYDENNQQNGSEILRYDKSIIQSPFKVQKIIERSCKFYGNNYLSKKAETNRITGISSKPPIL
LTPIFPTYFFPTHSDRQEENLWINMHYVESIKELKHRKCKITFANNETIILNISFHSLWHQYTNAIIFYYMVDKQSRMKS
NDLDKPIDYEKSSLNIFEALSRYSLFVDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=671074 MUA61_RS08725 WP_262551539.1 1795343..1795912(-) (comK/comK1) [Staphylococcus pasteuri strain IVB6198]
ATGACAACTCAGAGTATTTACGTTATTAGAAAGGGAGATATGGTTATCAGACCTAACTATGATGAAAATAATCAGCAAAA
TGGTTCTGAAATATTAAGGTATGATAAGTCAATTATTCAGAGTCCATTTAAGGTTCAAAAGATTATTGAAAGATCATGCA
AATTTTACGGTAATAATTATTTAAGTAAAAAAGCAGAAACTAATCGTATTACAGGTATTTCTAGTAAACCCCCGATTTTA
TTAACACCCATTTTTCCTACTTATTTTTTCCCAACACATTCTGACAGGCAAGAAGAAAATTTATGGATTAACATGCATTA
TGTTGAATCAATTAAAGAATTAAAACATCGTAAATGTAAAATCACATTTGCTAATAATGAAACGATTATTTTGAACATAT
CATTTCACAGTTTATGGCATCAATACACCAATGCAATTATCTTTTATTACATGGTTGATAAACAATCCCGCATGAAATCA
AATGACCTCGATAAACCTATTGATTATGAAAAATCCTCTTTAAATATCTTTGAAGCACTTTCACGTTATTCCCTATTTGT
AGACAAATAA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(6-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

77.249

100

0.772
  comK/comK1 Staphylococcus aureus N315

77.249

100

0.772