Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA72_RS04330 Genome accession   NZ_CP094714
Coordinates   955897..956940 (+) Length   347 a.a.
NCBI ID   WP_050330549.1    Uniprot ID   A0A0K1ACB9
Organism   Staphylococcus schleiferi strain IVB6176     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 950897..961940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA72_RS04305 (MUA72_04295) - 951319..952458 (+) 1140 WP_242678349.1 exo-alpha-sialidase -
  MUA72_RS04310 (MUA72_04300) - 952842..953840 (-) 999 WP_194368683.1 aromatic acid exporter family protein -
  MUA72_RS04315 (MUA72_04305) map 953938..954699 (+) 762 WP_167732697.1 type I methionyl aminopeptidase -
  MUA72_RS04320 (MUA72_04310) - 954797..955186 (+) 390 WP_016425509.1 hypothetical protein -
  MUA72_RS04325 (MUA72_04315) liaF 955199..955900 (+) 702 WP_016425508.1 cell wall-active antibiotics response protein LiaF -
  MUA72_RS04330 (MUA72_04320) vraS 955897..956940 (+) 1044 WP_050330549.1 sensor histidine kinase Regulator
  MUA72_RS04335 (MUA72_04325) vraR 956930..957559 (+) 630 WP_016425506.1 response regulator transcription factor Regulator
  MUA72_RS04340 (MUA72_04330) - 957614..958186 (-) 573 WP_016425505.1 carbonic anhydrase -
  MUA72_RS04345 (MUA72_04335) - 958219..959478 (-) 1260 WP_016425504.1 YihY/virulence factor BrkB family protein -
  MUA72_RS04350 (MUA72_04340) - 959769..960056 (-) 288 WP_016425503.1 YtxH domain-containing protein -
  MUA72_RS04355 (MUA72_04345) - 960064..960522 (-) 459 WP_016425502.1 low molecular weight protein-tyrosine-phosphatase -
  MUA72_RS04360 (MUA72_04350) - 960655..960858 (+) 204 WP_016425501.1 DUF1128 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40139.47 Da        Isoelectric Point: 5.4523

>NTDB_id=671023 MUA72_RS04330 WP_050330549.1 955897..956940(+) (vraS) [Staphylococcus schleiferi strain IVB6176]
MNHYVRAIGSMLILVYSMFTAFFFIDKVFTNIIYFQGMFYTQIFGIPVFIFLNLIVIFLCIIVGSVLAYKINQQNDWLKQ
QIERAFEGETVGINDQHIELYNETIELYQALVPLNQELHKMRIKTQNLTNESYNMNDLKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELTPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDRSLGEGIKSLVTDLQRKVPMKVVQEI
DEFEVPKGIEDHLFRITQEAISNTLRHAKGKQVTVELLNREDYLLLRIQDDGIGFNVDDKLEQSYGLKNMRERAIEIGAT
FHIVSLPDAGTRIEVKAPLDKEVHNDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=671023 MUA72_RS04330 WP_050330549.1 955897..956940(+) (vraS) [Staphylococcus schleiferi strain IVB6176]
ATGAACCATTACGTTCGTGCCATAGGCTCAATGTTGATTTTAGTCTACAGTATGTTTACTGCTTTTTTCTTTATTGATAA
AGTCTTTACTAATATCATTTATTTTCAAGGCATGTTTTATACCCAGATTTTTGGGATTCCCGTATTTATCTTTTTAAATT
TAATCGTTATCTTTCTTTGTATCATTGTAGGTAGCGTACTTGCCTATAAAATCAATCAACAAAATGATTGGTTGAAGCAA
CAAATTGAACGTGCATTTGAAGGGGAAACAGTAGGGATCAATGACCAACATATCGAATTATATAATGAGACGATTGAACT
GTATCAAGCCCTTGTTCCTTTGAATCAAGAACTTCATAAAATGCGTATTAAAACTCAAAATTTAACGAACGAATCTTATA
ATATGAACGATTTGAAAGTGAAAAAAATAATTGAAGATGAGAGACAACGGTTGGCTAGGGAATTACACGATAGTGTGTCC
CAACAACTCTTTGCGGCAAGCATGATGTTATCCGCGATTAAAGAAACAGAGTTAACCCCACCACTCGATCAGCAAATTCC
AACTTTAGAGAAAATGGTCCAAGATTCTCAGTTGGAGATGCGGGCGTTATTGTTACATTTGAGACCGATAGGACTTAAAG
ACCGCTCGTTAGGTGAAGGTATTAAATCATTAGTTACAGATCTACAAAGAAAAGTTCCAATGAAAGTTGTACAAGAAATT
GACGAATTTGAAGTGCCAAAAGGGATAGAAGACCACTTATTTCGAATCACTCAAGAAGCCATCTCTAATACATTACGTCA
TGCTAAAGGGAAACAAGTTACTGTCGAATTGCTCAATCGTGAAGACTATTTATTGTTGCGTATTCAAGATGACGGTATCG
GTTTTAATGTAGATGACAAATTAGAGCAAAGTTATGGACTTAAAAATATGCGTGAACGTGCAATAGAAATCGGGGCAACC
TTTCATATCGTTTCATTGCCAGACGCTGGGACGAGAATAGAAGTAAAGGCACCACTTGATAAGGAGGTACATAATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0K1ACB9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

84.438

100

0.844