Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OIE49_RS20110 Genome accession   NZ_CP109090
Coordinates   4427791..4428915 (-) Length   374 a.a.
NCBI ID   WP_100568559.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01788     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4422791..4433915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE49_RS20085 (OIE49_20090) cseB 4423180..4423881 (-) 702 WP_100568554.1 two-component system response regulator CseB -
  OIE49_RS20090 (OIE49_20095) - 4424086..4424751 (-) 666 WP_326803506.1 hypothetical protein -
  OIE49_RS20095 (OIE49_20100) - 4424739..4425278 (-) 540 WP_100568556.1 SigE family RNA polymerase sigma factor -
  OIE49_RS20100 (OIE49_20105) - 4425649..4426635 (-) 987 WP_326803507.1 A/G-specific adenine glycosylase -
  OIE49_RS20105 (OIE49_20110) - 4426839..4427711 (+) 873 WP_326803508.1 hypothetical protein -
  OIE49_RS20110 (OIE49_20115) disA 4427791..4428915 (-) 1125 WP_100568559.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIE49_RS20115 (OIE49_20120) radA/sms 4428998..4430407 (-) 1410 WP_326803509.1 DNA repair protein RadA Machinery gene
  OIE49_RS20120 (OIE49_20125) - 4430570..4432390 (+) 1821 WP_326803510.1 hypothetical protein -
  OIE49_RS20125 (OIE49_20130) - 4432853..4433629 (-) 777 WP_326806284.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40131.83 Da        Isoelectric Point: 4.9304

>NTDB_id=670778 OIE49_RS20110 WP_100568559.1 4427791..4428915(-) (disA) [Streptomyces sp. NBC_01788]
MAANDRAAAPGKSGGSSGTDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVISSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=670778 OIE49_RS20110 WP_100568559.1 4427791..4428915(-) (disA) [Streptomyces sp. NBC_01788]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGTTCCGGCACCGATGGCCTGATGCGCGCCTCTCT
GAGCGCCGTGGCACCCGGTACGGCCCTGCGGGACGGCCTCGAACGGGTGCTCCGTGGCAACACCGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAGTCGATGTGCACGGGCGGTTTCGTGCTGGATGTCGAGTTCACGGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGATCTCGTCCGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAACTGGTCCC
GGACCCGACGATCCCGACCGAGGAGACCGGCACCCGGCACCGCACTGCGGACCGGGTGAGCAAGCAGGTCGACTTCCCGG
TGGTCTCGGTCTCGCAGTCCATGCGGCTGATCGCCCTCTACGTCGACGGCCAGCGCCGTGTCCTGGAGGACTCCGCGGCG
ATCCTCTCCCGCGCCAATCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTGGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTCGCGCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGTCTCCTGGCCCTTCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGTTGGTGGTGCGCGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACCGTCGAGGA
GGCCCTGGCCGAGCTGGACAAGCTCTCCCACGCCGAGCTGCTCGAACTGTCCACCGTCGCCCGCGCCCTGGGCTACACCG
GCTCTCCGGAGACCCTCGACTCGGCGGTCTCCCCGCGCGGCTTCCGTCTGCTGGCCAAGGTGCCCCGGCTGCCCGGCGCC
ATCATCGACCGCCTGGTCGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGCGTGGGCGAGGCGCGGGCGCGGAGCGTCCGCGAGGGCCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441