Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA81_RS05165 Genome accession   NZ_CP094697
Coordinates   1107279..1108322 (+) Length   347 a.a.
NCBI ID   WP_262901255.1    Uniprot ID   -
Organism   Staphylococcus simulans strain IVB6244     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1102279..1113322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA81_RS05140 (MUA81_05130) - 1103282..1104001 (+) 720 WP_023015863.1 type 1 glutamine amidotransferase -
  MUA81_RS05145 (MUA81_05135) - 1104084..1105070 (-) 987 WP_002481667.1 aromatic acid exporter family protein -
  MUA81_RS05150 (MUA81_05140) map 1105290..1106054 (+) 765 WP_262901254.1 type I methionyl aminopeptidase -
  MUA81_RS05155 (MUA81_05145) - 1106170..1106565 (+) 396 WP_002481665.1 hypothetical protein -
  MUA81_RS05160 (MUA81_05150) liaF 1106581..1107282 (+) 702 WP_002481664.1 cell wall-active antibiotics response protein LiaF -
  MUA81_RS05165 (MUA81_05155) vraS 1107279..1108322 (+) 1044 WP_262901255.1 sensor histidine kinase Regulator
  MUA81_RS05170 (MUA81_05160) vraR 1108312..1108941 (+) 630 WP_002481662.1 response regulator transcription factor Regulator
  MUA81_RS05175 (MUA81_05165) - 1109012..1109590 (-) 579 WP_002481661.1 carbonic anhydrase -
  MUA81_RS05180 (MUA81_05170) - 1109798..1110874 (-) 1077 WP_262901256.1 YihY/virulence factor BrkB family protein -
  MUA81_RS05185 (MUA81_05175) - 1111005..1111295 (-) 291 WP_002481659.1 hypothetical protein -
  MUA81_RS05190 (MUA81_05180) - 1111303..1111767 (-) 465 WP_023015860.1 low molecular weight protein-tyrosine-phosphatase -
  MUA81_RS05195 (MUA81_05185) - 1111991..1112197 (+) 207 WP_002481657.1 DUF1128 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39931.17 Da        Isoelectric Point: 4.8944

>NTDB_id=670719 MUA81_RS05165 WP_262901255.1 1107279..1108322(+) (vraS) [Staphylococcus simulans strain IVB6244]
MNHYIRAIGSMLILNYSILAIFFFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNIIVILMSIIVGSVLAYKVNEQNDWIKT
QIEHSIEGEVVGINDQNIELYQETLDIYHTLVPLNQELHRLRIKTQDFTNETYNLNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESPLEPPLDQQIPTLEKMVQDSQLEMRALLLHLRPLGLKDRSLGEGIKDLVVDLQKKVPMKVVYDI
EDFEVPKGIEDHLFRITQEGISNTLRHAEGTKLTIDLFNKDDYLLLRIQDDGKGFDVDEKMEKSYGLKNMRERALEIGAT
LHIVSLPGAGTRIEVKAPLNKEENDGD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=670719 MUA81_RS05165 WP_262901255.1 1107279..1108322(+) (vraS) [Staphylococcus simulans strain IVB6244]
ATGAACCACTATATCAGAGCCATCGGTTCGATGCTGATATTGAACTATAGTATTTTAGCGATTTTCTTTTTTATAGACAA
AGTATTCGTCAACATCATCTACTTTCAAGGAATGTTTTACACGCAGATTTTCGGCATTCCTGTTTTCTTATTTTTAAATA
TTATAGTGATTTTGATGAGTATTATTGTTGGTTCTGTGTTAGCGTATAAAGTGAACGAACAAAATGATTGGATTAAAACA
CAAATCGAACATTCCATTGAAGGGGAAGTTGTCGGTATTAATGATCAAAATATCGAACTCTACCAAGAAACTTTGGATAT
CTATCATACACTTGTGCCATTAAACCAAGAATTACATCGACTACGTATTAAAACACAAGATTTCACCAATGAAACATATA
ATTTAAATGACGTTAAAGTGAAGAAAATTATAGAAGATGAACGCCAGCGTTTAGCTAGGGAATTGCATGATTCAGTTAGT
CAGCAATTATTTGCGGCAAGTATGATGTTATCGGCGATTAAGGAATCACCACTTGAACCGCCGCTTGATCAGCAAATTCC
GACACTAGAAAAGATGGTACAAGATTCGCAACTAGAAATGCGTGCATTGTTATTACATTTAAGACCGCTTGGCTTAAAAG
ATCGCTCACTTGGGGAAGGAATTAAAGATCTTGTTGTGGACTTACAAAAGAAAGTGCCTATGAAAGTAGTTTATGATATT
GAAGACTTTGAGGTACCAAAAGGCATAGAAGATCATTTATTCCGTATCACCCAAGAAGGGATTTCCAATACACTGCGACA
TGCAGAAGGCACAAAATTAACGATAGATTTATTTAATAAAGATGATTATCTATTATTGCGTATTCAAGATGATGGTAAAG
GCTTTGATGTAGATGAAAAAATGGAGAAAAGCTATGGATTGAAGAATATGCGAGAGCGAGCATTAGAAATCGGGGCAACA
CTGCATATTGTTTCTTTGCCTGGGGCAGGGACAAGAATTGAAGTGAAGGCTCCATTGAATAAGGAGGAAAATGATGGCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

85.879

100

0.859