Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OIE54_RS18430 Genome accession   NZ_CP109081
Coordinates   4114049..4115173 (+) Length   374 a.a.
NCBI ID   WP_326651705.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01794     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4109049..4120173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIE54_RS18415 (OIE54_18395) - 4109639..4110445 (+) 807 WP_326651708.1 hypothetical protein -
  OIE54_RS18420 (OIE54_18400) - 4110495..4112153 (-) 1659 WP_406731253.1 BACON domain-containing protein -
  OIE54_RS18425 (OIE54_18405) radA/sms 4112550..4114004 (+) 1455 WP_326651706.1 DNA repair protein RadA Machinery gene
  OIE54_RS18430 (OIE54_18410) disA 4114049..4115173 (+) 1125 WP_326651705.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIE54_RS18435 (OIE54_18415) - 4115197..4115988 (-) 792 WP_326651704.1 hypothetical protein -
  OIE54_RS18440 (OIE54_18420) - 4116374..4117288 (+) 915 WP_406731254.1 A/G-specific adenine glycosylase -
  OIE54_RS18445 (OIE54_18425) - 4117484..4118050 (+) 567 WP_326651702.1 SigE family RNA polymerase sigma factor -
  OIE54_RS18450 (OIE54_18430) - 4118038..4118709 (+) 672 WP_326651701.1 hypothetical protein -
  OIE54_RS18455 (OIE54_18435) cseB 4118722..4119426 (+) 705 WP_326651700.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40238.10 Da        Isoelectric Point: 5.0263

>NTDB_id=670690 OIE54_RS18430 WP_326651705.1 4114049..4115173(+) (disA) [Streptomyces sp. NBC_01794]
MAAKDGASAPGKSGGGSGNEALIRAALSAVAPGTALRDGLERILRGNTGGLLVLGMDKTVESMCTGGFVLDVEFTSTRLR
ELCKLDGALILDKDISKIHRAGVQLVPDASIPTEETGTRHRTADRVSRQCAYPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELNELTHAELLELPIVAKALGYTGAPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=670690 OIE54_RS18430 WP_326651705.1 4114049..4115173(+) (disA) [Streptomyces sp. NBC_01794]
GTGGCAGCCAAGGACGGGGCATCAGCACCCGGAAAGTCCGGCGGAGGCTCCGGCAACGAAGCGCTGATCCGCGCCGCCCT
GAGCGCGGTCGCTCCCGGCACCGCCCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGCAACACCGGAGGCCTGCTCGTCC
TCGGCATGGACAAAACTGTCGAATCCATGTGTACCGGCGGTTTTGTGCTGGATGTGGAATTCACCTCGACCCGGCTGCGC
GAGCTGTGCAAACTCGACGGCGCGCTCATCCTCGACAAGGACATCAGCAAGATCCACCGGGCCGGTGTGCAGCTGGTCCC
GGACGCGTCCATCCCTACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGGGTATCCCGGCAGTGCGCCTACCCGG
TCGTCTCCGTATCGCAGTCCATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGCCGCGTGCTGGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTGGCGGGCACACTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTGGCGCAGCGTCTGGAGATGGTGCGCCGGATCG
CCACCGAAATCGCCGAGTACGTGGTGGAGTTGGGCACCGACGGCCGCCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCC
GGAGTGGAGCCGGAGCGGGAGCTGGTCGTCCGTGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCCGA
GGCGCTCACCGAGCTGAATGAGCTCACCCACGCCGAGCTGCTCGAACTGCCTATAGTCGCGAAGGCGTTGGGATACACCG
GCGCTCCCGAAACACTCGACTCCGCGGTCTCGCCACGGGGTTACCGCCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGAGCGGCTCGTCGAGCATTTCGGCGGACTGCAGAAGCTTCTCGCGGCCAGCGTCGACGATCTGCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCCCGCAGCGTGCGCGAGGGGCTTTCACGGCTCGCCGAGTCCTCGATCCTCGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436