Detailed information NTG0670643

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIE63_RS26770
• Genome accession: NZ_CP109079
• Coordinates: 6071113..6072396 (+)
• Length: 427 a.a.
• NCBI ID: WP_326692942.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01795
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6066113..6077396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE63_RS26740 (OIE63_26750)	-	6067084..6067278 (+)	195	WP_326690386.1	hypothetical protein	-
OIE63_RS26755 (OIE63_26765)	tig	6067926..6069368 (+)	1443	WP_326690387.1	trigger factor	-
OIE63_RS26760 (OIE63_26770)	clpP	6069617..6070222 (+)	606	WP_326692941.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE63_RS26765 (OIE63_26775)	clpP	6070290..6070949 (+)	660	WP_326690388.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE63_RS26770 (OIE63_26780)	clpX	6071113..6072396 (+)	1284	WP_326692942.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIE63_RS26775 (OIE63_26785)	-	6072545..6073396 (-)	852	WP_326690389.1	hypothetical protein	-
OIE63_RS26780 (OIE63_26790)	-	6073667..6074698 (-)	1032	WP_326690390.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46797.42 Da
• Isoelectric Point: 4.7396

>NTDB_id=670643 OIE63_RS26770 WP_326692942.1 6071113..6072396(+) (clpX) [Streptomyces sp. NBC_01795]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWDELPKPREISEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENTPGRDDGIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDVE
NILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQID
TTNVLFIVGGAFAGLEKIIESRAGAKGIGFGADIRSKREIEASNQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDREA
LLQILMEPKNALIKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVERVVITEE
VVHSNVNPTLVPRARGNGDQQHHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=670643 OIE63_RS26770 WP_326692942.1 6071113..6072396(+) (clpX) [Streptomyces sp. NBC_01795]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCAGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCAGAGTCCT
CCGAGGTGCGCTGGGACGAGCTTCCCAAGCCGCGTGAGATCTCTGAGTTCCTGGAGGGCTACGTCGTCGGCCAGGAGGCC
GCGAAGAAGGCCCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGTGAGAACACCCCGGGGCGCGACGA
CGGCATCGAGCTGTCGAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACCCTGCTCGCGCAGACGCTCG
CCCGGATGCTCAACGTCCCCTTCGCCATTGCCGACGCCACGGCGCTCACCGAGGCGGGCTACGTCGGCGAGGACGTCGAG
AACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGACGAGAT
CGACAAGGTCGCCCGCAAGAGCGAGAACCCCTCGATCACCCGCGATGTCTCCGGTGAAGGTGTCCAGCAGGCGCTGCTGA
AGATCCTGGAGGGCACGACAGCCTCCGTGCCGCCGCAGGGCGGCAGGAAGCACCCGCACCAGGAGTTCATCCAGATCGAC
ACGACGAACGTGCTGTTCATCGTCGGCGGTGCCTTCGCCGGTCTGGAGAAGATCATCGAGTCCCGCGCGGGCGCCAAGGG
CATCGGCTTCGGTGCCGACATCCGCTCCAAGCGCGAGATCGAGGCGAGCAACCAGTTCGAGGAGGTCATGCCGGAGGACC
TGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCCGTCCACAACCTCGACCGCGAGGCG
CTGCTCCAGATCCTGATGGAGCCGAAGAACGCCTTGATCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGTGGAGCT
GGACTTCGACCGTCCCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTCCGGGGCACCGGAGCGCGCGGGCTGCGCGCCA
TCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCCTCCCGCAAGGACGTGGAGCGCGTCGTGATCACCGAAGAG
GTCGTCCACTCCAACGTGAACCCGACCCTGGTGCCGCGGGCCCGTGGCAACGGGGACCAGCAGCACCACGAGAAGAGCGC
CTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (113-310)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.5	93.677	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.257	95.785	0.529