Detailed information NTG0670494

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIE51_RS19675
• Genome accession: NZ_CP109073
• Coordinates: 4326483..4327781 (+)
• Length: 432 a.a.
• NCBI ID: WP_326599057.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01803
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4321483..4332781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE51_RS19645 (OIE51_19680)	-	4322666..4322884 (+)	219	WP_326599053.1	hypothetical protein	-
OIE51_RS19660 (OIE51_19695)	tig	4323304..4324728 (+)	1425	WP_326599054.1	trigger factor	-
OIE51_RS19665 (OIE51_19700)	clpP	4324944..4325558 (+)	615	WP_326599055.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE51_RS19670 (OIE51_19705)	clpP	4325629..4326279 (+)	651	WP_326599056.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE51_RS19675 (OIE51_19710)	clpX	4326483..4327781 (+)	1299	WP_326599057.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIE51_RS19680 (OIE51_19715)	-	4327874..4328992 (-)	1119	WP_326599058.1	hypothetical protein	-
OIE51_RS19685 (OIE51_19720)	-	4329117..4331747 (+)	2631	WP_326599059.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47204.92 Da
• Isoelectric Point: 4.7665

>NTDB_id=670494 OIE51_RS19675 WP_326599057.1 4326483..4327781(+) (clpX) [Streptomyces sp. NBC_01803]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESPESELSELPKPREIYDFLESYVVGQED
AKKALSVAVYNHYKRVRASEADASSRDEEIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAITDATALTEAGYVGEDV
ENILLKLIQAADYDIKKAEQGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTAAVPPQGGRKHPHQEFLQI
DTSNVLFIVGGAFAGLDDIIRARSGGRGIGFGADIRSKRDRDSGQILTDALPEDLVKYGMIPEFIGRLPVITSVHNLDRE
ALLRILVEPRNALVKQYQRLFELDGVELQFDLPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRQDVGQVLITE
DVVRSNVNPTLVPRSRLTKQRGGSAAPHEKTA

Nucleotide

• Length: 1299 bp

>NTDB_id=670494 OIE51_RS19675 WP_326599057.1 4326483..4327781(+) (clpX) [Streptomyces sp. NBC_01803]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCATTCTGCGGCAAGAGTCAGAAACAGGTGAAGAAGCTCAT
CGCGGGTCCGGGGGTCTACATCTGCGATGAATGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGTCAC
CCGAGTCGGAGCTGAGCGAGCTCCCGAAGCCGCGCGAGATCTACGACTTCCTGGAAAGTTATGTGGTCGGCCAGGAAGAC
GCCAAGAAGGCCCTTTCGGTGGCTGTCTACAACCACTACAAGCGGGTGCGGGCCAGCGAGGCCGACGCCTCGTCGCGTGA
CGAGGAGATCGAGCTCGCCAAGTCGAACATCCTGCTGCTCGGCCCGACGGGCTCCGGCAAGACGCTGCTGGCCCAGACGC
TGGCCCGGATGCTCAACGTCCCCTTCGCCATCACGGACGCCACGGCGCTGACCGAGGCGGGCTATGTGGGCGAGGACGTG
GAGAACATCCTGCTCAAGCTCATCCAGGCCGCGGACTACGACATCAAGAAGGCCGAGCAGGGCATCATCTACATCGACGA
GATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTGTCCGGCGAGGGTGTCCAGCAGGCGCTGC
TGAAGATCCTGGAGGGCACCACCGCCGCGGTGCCGCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCCTGCAGATC
GACACGTCCAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGGCTGGACGACATCATCCGGGCCCGGTCGGGCGGTCG
GGGCATCGGCTTCGGCGCGGACATCCGCTCCAAGCGCGACCGCGACTCGGGCCAGATCCTCACGGACGCCCTTCCGGAGG
ACCTGGTCAAGTACGGCATGATCCCGGAGTTCATCGGCCGGCTGCCGGTCATCACCTCCGTGCACAACCTGGACCGTGAG
GCGCTGCTGCGCATTCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGTTGTTCGAGCTCGACGGTGTGGA
GCTGCAGTTCGACCTCCCCGCGCTGGAGGCCATCGCCGATCAGGCGATCCTGCGCGGCACGGGCGCCCGCGGCCTGCGGG
CGATCATGGAGGAGGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCCAGGACGTGGGCCAGGTGCTGATCACCGAG
GACGTCGTCAGGTCCAACGTGAACCCCACGCTGGTCCCGCGCTCCCGGCTGACCAAGCAGCGCGGCGGCAGCGCGGCGCC
GCACGAGAAGACGGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (114-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-393)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.594	92.824	0.581
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	52.927	94.907	0.502