NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	OG440_RS17140	Genome accession	NZ_CP109046
Coordinates	3935632..3938244 (-)	Length	870 a.a.
NCBI ID	WP_406007694.1	Uniprot ID	-
Organism	Streptomyces sp. NBC_00637 strain NBC 00637
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3930632..3943244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG440_RS17120 (OG440_17145)	-	3932093..3932647 (-)	555	WP_406007690.1	DUF2617 family protein	-
OG440_RS17125 (OG440_17150)	-	3933104..3933406 (-)	303	WP_406007691.1	hypothetical protein	-
OG440_RS17130 (OG440_17155)	-	3933547..3934743 (+)	1197	WP_406007692.1	pyridoxal phosphate-dependent aminotransferase	-
OG440_RS17135 (OG440_17160)	-	3934857..3935420 (-)	564	WP_406007693.1	YbjN domain-containing protein	-
OG440_RS17140 (OG440_17165)	clpC	3935632..3938244 (-)	2613	WP_406007694.1	ATP-dependent chaperone ClpB	Regulator
OG440_RS17145 (OG440_17170)	-	3938366..3938779 (+)	414	WP_406007695.1	pyridoxamine 5'-phosphate oxidase family protein	-
OG440_RS17150 (OG440_17175)	-	3938957..3939292 (-)	336	WP_054241900.1	hypothetical protein	-
OG440_RS17155 (OG440_17180)	-	3939359..3939574 (+)	216	WP_406007696.1	hypothetical protein	-
OG440_RS17160 (OG440_17185)	-	3939818..3940666 (+)	849	WP_385679230.1	helix-turn-helix transcriptional regulator	-
OG440_RS17165 (OG440_17190)	-	3940830..3941900 (+)	1071	WP_406007697.1	helix-turn-helix transcriptional regulator	-
OG440_RS17170 (OG440_17195)	-	3941785..3942900 (-)	1116	WP_406007698.1	LuxR C-terminal-related transcriptional regulator	-

Sequence

Protein

Download Length: 870 a.a. Molecular weight: 94917.38 Da Isoelectric Point: 4.7434

                                >NTDB_id=670241 OG440_RS17140 WP_406007694.1 3935632..3938244(-) (clpC) [Streptomyces sp. NBC_00637 strain NBC 00637]

MDAELTNRSRDAINAASNRAVSQGHADLIPAHLLLALLQGQENDNIIDLLAAVDADQAAVRAGAEKVLGALPSVTGSTVA

PPQPNRELLAVIADAQSRAADLGDEYLSTEHLLIGIAAKGGQAGDVLARHGATAKKLQEAFQKSRGGRRVTSADPEGQYK

ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLRNKRLVA

LDLGAMVAGAKYRGEFEERLKTVLAEIKDSDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE

YRERIEKDPALERRFQQVLVAEPSVEDTIAILRGLKGRYEAHHKVQIADAALVAAATLSDRYITSRFLPDKAIDLVDEAA

SRLRMEIDSSPVEIDELQRSVDRLKMEELALSKETDAASRERLEKLRRDLADREEELRLLTARWEKEKQSLNRVGALKEK

LDDLRGQAERAQRDGDFDTASKLLYGEIPTLERDLEAATEAEEEAAKDTMVKEEVGSDDIADVVASWTGIPAGRLLEGET

QKLLRMEEELGRRLIGQAEAVQAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMSE

YGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFRNTILVL

TSNLGSQYLVDPVTTEAEKKEQVLEVVRASFKPEFLNRLDDLVVFSALNKTELERIARLQIDRLAKRLAERRLTLEVTDA

ALAWLADEGNDPAYGARPLRRLVQTAIGDRLAKEILAGEVKDGDTVRVDSFGEGEGLIVGPATTDPGKTL

Nucleotide

Download Length: 2613 bp

                                >NTDB_id=670241 OG440_RS17140 WP_406007694.1 3935632..3938244(-) (clpC) [Streptomyces sp. NBC_00637 strain NBC 00637]

GTGGACGCCGAGCTGACCAACCGGAGCCGGGACGCGATCAACGCGGCCAGCAACAGGGCCGTGTCCCAGGGACACGCCGA

CCTCATCCCCGCCCATCTGCTGCTCGCTCTGCTCCAGGGGCAGGAGAACGACAACATCATCGATCTCCTGGCCGCCGTCG

ACGCGGACCAGGCGGCCGTGCGGGCCGGGGCCGAGAAGGTGCTCGGCGCGCTGCCCAGCGTGACCGGGTCGACCGTCGCG

CCCCCGCAGCCCAACCGCGAGCTGCTGGCCGTCATCGCCGACGCGCAGAGCCGTGCCGCCGACCTGGGGGACGAGTACCT

GTCGACCGAGCACCTGCTCATCGGCATCGCAGCCAAGGGAGGACAGGCCGGTGACGTGCTGGCACGGCACGGAGCGACCG

CGAAGAAGCTCCAGGAGGCCTTCCAGAAGTCCCGCGGCGGGCGCCGGGTGACCAGCGCCGACCCCGAGGGGCAGTACAAG

GCCCTGGAGAAGTTCGGGACGGACTTCACCGCCGCCGCCCGCGAGGGCAAGCTCGACCCGGTCATCGGGCGGGACCAGGA

GATCCGGCGCGTCGTGCAGGTCCTGTCCCGGCGCACGAAGAACAACCCCGTCCTCATCGGCGAGCCCGGCGTCGGCAAGA

CCGCCGTCGTCGAAGGCCTCGCCCAGCGGATCGTCAAGGGCGACGTGCCCGAGTCCCTCAGGAACAAGCGGCTCGTCGCG

CTCGACCTCGGCGCGATGGTCGCGGGCGCCAAGTACCGGGGCGAGTTCGAGGAGCGGCTGAAGACCGTCCTCGCCGAGAT

CAAGGACTCCGACGGCCAGATCATCACCTTCATCGACGAGCTGCACACGGTCGTCGGCGCGGGAGCGGGCGGCGACTCCG

CCATGGACGCCGGCAACATGCTCAAGCCCATGCTCGCGCGCGGCGAGCTGCGCATGGTCGGCGCGACGACCCTCGACGAG

TACCGGGAGCGGATCGAGAAGGACCCCGCCCTGGAGCGCCGCTTCCAGCAGGTGCTGGTGGCGGAGCCGTCGGTCGAGGA

CACCATCGCGATCCTGCGCGGGCTCAAGGGCCGCTACGAGGCCCACCACAAGGTGCAGATCGCGGACGCGGCCCTGGTCG

CCGCCGCGACCCTCTCCGACCGGTACATCACCTCCCGCTTCCTCCCCGACAAGGCCATCGACCTGGTCGACGAGGCGGCC

TCCCGCCTGCGTATGGAGATCGACTCCTCCCCGGTCGAGATCGACGAGCTCCAGCGGTCCGTGGACCGGCTGAAGATGGA

GGAGCTGGCGCTCAGCAAGGAGACGGACGCCGCCTCCCGCGAACGGCTGGAGAAGCTGCGCCGCGACCTCGCCGACCGGG

AGGAGGAGCTGCGCCTGCTCACCGCCCGCTGGGAGAAGGAGAAGCAGTCCCTGAACCGGGTCGGCGCGCTGAAGGAGAAG

CTCGACGACCTGCGCGGCCAGGCCGAGCGCGCCCAGCGCGACGGCGACTTCGACACCGCCAGCAAGCTGCTGTACGGCGA

GATCCCGACCCTGGAGCGCGACCTGGAGGCCGCGACCGAGGCCGAGGAGGAGGCCGCGAAGGACACCATGGTCAAGGAGG

AGGTCGGCTCGGACGACATCGCCGACGTCGTCGCCTCCTGGACCGGCATCCCCGCGGGCCGCCTCCTGGAGGGCGAGACG

CAGAAGCTGCTGCGCATGGAGGAGGAGCTCGGCCGCCGCCTCATCGGCCAGGCCGAGGCGGTCCAGGCGGTATCCGACGC

CGTACGCCGCTCCCGCGCCGGTATCGCCGACCCCGACCGCCCCACCGGCTCCTTCCTCTTCCTCGGTCCGACCGGCGTCG

GCAAGACCGAGCTGGCCAAGGCCCTCGCCGACTTCCTCTTCGACGATGAGCGGGCCATGATCCGCATCGACATGTCGGAG

TACGGGGAGAAGCACAGCGTCGCCCGTCTGGTCGGCGCCCCGCCCGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCAC

CGAGGCCGTCCGCAGGCGCCCGTACAGCGTGGTCCTGCTGGACGAGGTCGAGAAGGCGCACCCGGAGGTCTTCGACGTCC

TGCTCCAGGTGCTGGACGACGGCCGGCTGACCGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACCATCCTGGTGCTG

ACGTCCAACCTGGGCAGCCAGTATCTGGTCGATCCGGTGACCACCGAGGCGGAGAAGAAGGAGCAGGTCCTGGAGGTGGT

GAGGGCCTCGTTCAAGCCGGAGTTCCTCAACCGGCTCGACGACCTGGTCGTCTTCTCGGCCCTGAACAAGACGGAACTGG

AGCGCATCGCCCGCCTCCAGATCGACCGCCTGGCCAAGCGGCTCGCCGAACGCCGCCTCACCCTGGAGGTCACCGACGCG

GCCCTGGCCTGGCTCGCCGACGAGGGCAACGACCCGGCCTACGGCGCCCGCCCGCTGCGCCGCCTGGTCCAGACGGCCAT

CGGCGACCGGCTCGCCAAGGAGATCCTGGCCGGCGAGGTCAAGGACGGCGACACGGTCCGGGTGGACTCCTTCGGCGAGG

GCGAGGGCCTGATCGTGGGCCCGGCGACGACGGACCCGGGCAAGACGCTGTAA