Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG826_RS20520 Genome accession   NZ_CP109041
Coordinates   4580578..4581702 (+) Length   374 a.a.
NCBI ID   WP_266761294.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00645     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4575578..4586702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG826_RS20505 (OG826_20515) - 4576034..4576873 (+) 840 WP_266761298.1 hypothetical protein -
  OG826_RS20510 (OG826_20520) - 4576928..4578736 (-) 1809 WP_266761297.1 BACON domain-containing protein -
  OG826_RS20515 (OG826_20525) radA/sms 4579100..4580509 (+) 1410 WP_266761296.1 DNA repair protein RadA Machinery gene
  OG826_RS20520 (OG826_20530) disA 4580578..4581702 (+) 1125 WP_266761294.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG826_RS20525 (OG826_20535) - 4581852..4582685 (-) 834 WP_266761292.1 hypothetical protein -
  OG826_RS20530 (OG826_20540) - 4582877..4583794 (+) 918 WP_266761290.1 A/G-specific adenine glycosylase -
  OG826_RS20535 (OG826_20545) - 4584046..4584585 (+) 540 WP_266761288.1 SigE family RNA polymerase sigma factor -
  OG826_RS20540 (OG826_20550) - 4584573..4585223 (+) 651 WP_266761286.1 hypothetical protein -
  OG826_RS20545 (OG826_20555) cseB 4585243..4585950 (+) 708 WP_266761284.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40129.90 Da        Isoelectric Point: 4.9234

>NTDB_id=670157 OG826_RS20520 WP_266761294.1 4580578..4581702(+) (disA) [Streptomyces sp. NBC_00645]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALFELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=670157 OG826_RS20520 WP_266761294.1 4580578..4581702(+) (disA) [Streptomyces sp. NBC_00645]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGCGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
CAGCGCCGTGGCACCCGGTACGGCACTGCGCGACGGGCTTGAACGGATTCTCCGGGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCGATGTGCACGGGTGGTTTTGTCCTGGATGTCGAGTTCACCGCGACCCGTCTGCGC
GAACTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAGATCCTTCGGGCGGGCGTGCAGCTGGTGCC
CGACCCGACGATCCCGACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTCTCGGTCTCCCAGTCGATGCGTCTGATCGCCCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGCTACAAGCTGCGCCTGGACGAGGTCGCGGGAACGCTGTC
GGCGCTGGAGATCGAGGACCTCGTCACCGTCCGGGACGTCTCCGCGGTCGCCCAGCGTCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTCGAGCTGGGCACCGACGGGCGTCTGCTGACCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGATCGCGAGCTGGTCGTCCGGGACTACGTTCCCGAGCCGACCGCCAAGCGTTCCCGCACGGTCGACGA
GGCGTTGTTCGAGCTGGACGCGCTCAGCCACGCGGAGCTCCTCGAACTCTCCACAGTGGCACGGGCGTTGGGTTACACCG
GCTCCCCCGAGGCGCTCGACTCCGCGGTCTCCCCGCGTGGTTTCCGCCTTCTCGCCAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGACCGGCTCGTGGAGCATTTCGGCGGGCTCCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACGGTCGA
CGGCGTGGGCGAGGCCCGGGCGCGCAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCGTCGATCCTGGAGCGTTACG
TCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436