Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MST16_RS03985 Genome accession   NZ_CP094541
Coordinates   840353..844867 (+) Length   1504 a.a.
NCBI ID   WP_180009832.1    Uniprot ID   -
Organism   Acinetobacter sp. YH16040_T     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 835353..849867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MST16_RS03960 (MST16_03955) - 835809..836402 (-) 594 WP_373683440.1 hypothetical protein -
  MST16_RS03965 (MST16_03960) pilG 836746..837129 (+) 384 WP_078191060.1 twitching motility response regulator PilG Regulator
  MST16_RS03970 (MST16_03965) - 837159..837527 (+) 369 WP_078191059.1 response regulator -
  MST16_RS03975 (MST16_03970) - 837534..838070 (+) 537 WP_111884922.1 chemotaxis protein CheW -
  MST16_RS03980 (MST16_03975) - 838115..840190 (+) 2076 WP_078192256.1 methyl-accepting chemotaxis protein -
  MST16_RS03985 (MST16_03980) chpA 840353..844867 (+) 4515 WP_180009832.1 Hpt domain-containing protein Regulator
  MST16_RS03990 (MST16_03985) - 844871..845338 (+) 468 WP_180004987.1 hypothetical protein -
  MST16_RS03995 (MST16_03990) dapE 845408..846541 (-) 1134 WP_180009831.1 succinyl-diaminopimelate desuccinylase -
  MST16_RS04000 (MST16_03995) - 846663..846812 (-) 150 WP_180004989.1 entericidin A/B family lipoprotein -
  MST16_RS04005 (MST16_04000) - 846976..847839 (-) 864 WP_180009830.1 DUF1853 family protein -
  MST16_RS04010 (MST16_04005) - 847928..848362 (+) 435 WP_180004991.1 YbaN family protein -
  MST16_RS04015 (MST16_04010) elsL 848355..848849 (+) 495 WP_078192250.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1504 a.a.        Molecular weight: 167738.67 Da        Isoelectric Point: 4.3391

>NTDB_id=670085 MST16_RS03985 WP_180009832.1 840353..844867(+) (chpA) [Acinetobacter sp. YH16040_T]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFEELAGLFTTWLENPQDKDTLTTIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVIAGSVQLTPTVQKFAQTVLNVYQYKLYPRFKNVAELDVDLRPLVLMGQQLQQNISLEPALEELLKL
ADQLKSEDGVTGLELTDVEATASVEVLESTIDAVVESEPAPEQVDADASLVEETVSIFIEEAEEHLQTIDQFLQSDDSKS
QDYNGLIRALHTLRGSSSMAQIEEIFEASSKVENLFKTLLQDEIVSSSKETALLIQYAEFVRDYLHVLRSGDKANLTSIY
ETFKAAWDDYGFASQDQLAPEDNPQGLVSKLIELNIDQLLDAEFEFDKRALAEFPDYIQQLSQQALELIEHTDNRASVGI
HDFTTQLRAAYQSLVEKPELLHADYGYELFAQAHQEFIHLFDTLAAGQRVVLSEDVQRFLNELTAFVQQDIEAVAATTTP
EAHVVAEPVATVEDKAAVPNTTAVDFAQLSQRIQLDHQQMQAVDANNDFDEDLLGIFIEEAEELLVGIDQDLSTWTRDQT
NTSALNNLMRYLHTLKGGANMIAASHVGLISHELESIYERIIRQQISITPALIQIIRLVQDDISDRIQTIRDQGIDYPAN
NVIDILKNIQSIVAGERSEAVALASAPISAETEQTAVEPDVSVSEPMDVAEDTAEAVVEAQTTAHTESAVEHLEHAVAEH
VEHPDDDLRSVMEETFLEESEEILEQAVQLLNQWTEQRSDRNVLLQLQRAAHSIKGGARMVENEPVAAIAYQLETTFEHF
AVHHFNSNAYDGLLKTTLAWLKEAIFNHDYSNFDSIKLSLESIQYVDVTVQLPNRVAELEQGIVSKGFEFIQGDGVEPPS
MLGEWSEANSSDNSNEMIRISADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMDGELESQIIA
KHGSENSRYADFDPLEMDQYSSINQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQSEIQESLMRTRLVPFDRL
LPRLQRIVRQTSSTLNRPAELIVQNTEGELDRTILERLVTPFEHMLRNAVDHGLEDPADRLALKKPEVGSIVLNISRQGT
DVLVSFSDDGKGIDEAKIKDKALKLGLIKADQFLDKQEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVSV
ESELGKGTTFTIRVPTTVAVSDALMVKAGDQQYAISLAQIERIVRIAPTALETYFNSKDDVFKIDNTNYKLRYLSEFVGN
QPIPRLNNVGHSLPVLLIKGNSGQTIALLVDQLVGSRSQIVVKPIGQQFTSVAAIAGATILGDGHVCLILDGQNIARQIQ
TTQRVKHSAEQRDLGRQANARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDG
FEVTNLVRHHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEALIAEKQG

Nucleotide


Download         Length: 4515 bp        

>NTDB_id=670085 MST16_RS03985 WP_180009832.1 840353..844867(+) (chpA) [Acinetobacter sp. YH16040_T]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACAACTACGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTTT
AGAGATTTTTGTTGAAGAAATAGAAGAAATCTTTGAAGAACTGGCGGGTTTATTTACAACTTGGTTGGAAAATCCACAAG
ATAAAGACACTTTAACGACGATTCGTCGTCATTTCCATACACTGAAAGGTTCAGGTCGTATGGTTGGGGCAAAATCGGCG
GGTGAAACTGCATGGGCAGTTGAAGATACGCTGAACCGTGTCATTGCGGGTTCAGTACAGTTAACGCCGACCGTTCAAAA
GTTTGCACAAACAGTTTTAAATGTTTATCAATATAAGCTCTATCCACGGTTTAAAAATGTTGCCGAATTGGATGTTGACT
TACGTCCATTGGTTTTAATGGGGCAACAATTACAACAAAATATTAGCCTTGAGCCTGCACTCGAAGAATTATTAAAACTG
GCAGATCAATTAAAATCTGAAGATGGTGTCACTGGTTTAGAACTGACTGATGTTGAAGCTACAGCGTCTGTAGAAGTGCT
TGAAAGCACAATTGATGCGGTTGTTGAATCAGAACCTGCTCCTGAACAAGTGGATGCAGATGCATCACTGGTCGAAGAGA
CAGTGAGCATTTTTATTGAAGAAGCTGAAGAACATCTACAAACGATTGATCAGTTCCTCCAATCTGATGACAGTAAATCA
CAAGATTATAATGGCTTGATTCGCGCGCTACACACCTTGCGTGGTAGTTCGTCGATGGCGCAAATCGAAGAGATTTTTGA
AGCCAGTTCAAAAGTTGAAAACTTATTCAAAACCTTATTACAAGACGAAATCGTATCGAGCTCGAAAGAAACTGCTTTAT
TGATTCAATATGCTGAATTTGTTCGTGATTATTTGCACGTGCTGCGTTCAGGGGATAAGGCAAATCTTACATCTATTTAT
GAAACCTTCAAAGCTGCTTGGGATGATTATGGTTTTGCTAGCCAAGATCAATTGGCGCCTGAAGATAATCCGCAAGGTTT
GGTTTCTAAACTAATCGAATTAAATATTGATCAGTTATTAGATGCTGAATTTGAGTTTGATAAACGTGCCCTTGCTGAAT
TCCCAGACTATATTCAACAGCTTAGTCAACAAGCTTTAGAGTTGATTGAACATACGGATAATCGTGCGTCTGTTGGAATC
CATGATTTCACAACTCAACTGCGTGCAGCATATCAGTCTTTAGTTGAAAAGCCTGAATTACTCCATGCTGATTATGGCTA
TGAGTTATTTGCGCAAGCACATCAGGAGTTTATTCACTTATTTGACACTTTAGCTGCGGGTCAGCGTGTGGTGTTAAGTG
AAGATGTTCAACGTTTCTTAAATGAGCTGACTGCATTTGTTCAACAAGACATTGAAGCAGTTGCAGCGACGACAACACCA
GAAGCCCATGTAGTTGCTGAACCTGTTGCCACTGTAGAAGATAAAGCCGCTGTTCCAAATACAACAGCAGTAGACTTTGC
ACAATTAAGTCAGCGTATTCAACTTGATCATCAACAGATGCAAGCGGTGGATGCGAATAATGACTTTGATGAAGATCTTT
TAGGGATCTTTATTGAAGAGGCAGAAGAATTATTGGTGGGGATTGATCAAGACCTCAGTACTTGGACACGTGATCAGACC
AATACTTCAGCTTTGAATAATTTAATGCGTTATTTGCATACCCTAAAAGGTGGTGCAAATATGATTGCCGCATCTCATGT
GGGTTTAATTTCGCATGAATTAGAATCGATTTATGAGCGCATTATTCGTCAGCAAATTTCGATTACGCCTGCGTTAATTC
AAATTATTCGTTTAGTGCAGGATGATATTTCAGATCGTATTCAAACCATTCGTGACCAAGGGATCGACTACCCAGCGAAT
AATGTGATCGATATTCTCAAGAATATTCAGTCAATTGTGGCAGGAGAGCGTTCAGAAGCTGTTGCATTGGCTTCGGCCCC
TATTTCTGCTGAAACTGAACAAACAGCAGTAGAACCAGATGTATCGGTGTCAGAGCCGATGGATGTTGCTGAAGACACTG
CAGAAGCAGTGGTTGAAGCTCAAACGACTGCTCACACTGAGTCTGCTGTTGAACATCTTGAACATGCGGTTGCTGAACAT
GTTGAGCATCCAGATGACGATCTACGTTCTGTCATGGAAGAAACCTTCCTTGAAGAGTCTGAGGAAATTCTTGAACAAGC
CGTTCAATTATTAAATCAATGGACTGAACAACGTAGTGACCGTAACGTATTGCTTCAATTACAACGTGCTGCCCACAGTA
TTAAGGGTGGTGCGCGTATGGTTGAAAATGAACCTGTTGCCGCAATTGCGTATCAACTTGAGACGACGTTTGAGCATTTC
GCGGTTCATCATTTCAACTCAAATGCATATGACGGCTTACTCAAAACGACGTTGGCATGGTTAAAAGAAGCGATCTTCAA
CCACGACTATAGTAATTTTGATAGCATCAAATTGAGCCTAGAATCCATTCAGTATGTGGATGTTACGGTTCAATTGCCAA
ACCGTGTTGCAGAATTAGAACAAGGTATTGTCAGTAAAGGCTTTGAATTTATTCAAGGTGATGGTGTTGAACCTCCATCT
ATGTTGGGTGAATGGTCTGAAGCTAATTCTTCTGATAACAGTAATGAGATGATTCGTATCTCGGCTGATCTCGTCGAGAA
GATGATTGACTTATCAGGCGAAAACTCGATTAACCGTTCACGTATTGAGATGGACTTAGGTCAGCTAGGCAATACCTTGA
ATGAAATGGAGTTAGCAATTAAGCGACTTGCTGACCAGTTACGTCGAATGGATGGTGAGCTTGAGTCACAAATTATTGCC
AAACATGGTTCTGAAAATTCACGCTATGCGGATTTCGACCCATTGGAGATGGACCAATATTCATCGATTAACCAATTGTC
AAAATCTCTAGCCGAATCTGCGTCGGATTTGGTTGACTTCAAGAGTACTTTGGCAGAAAAAATCCGTGATGCGGAAGGTT
TGTTATTACAACAATCACGTATTCAGTCAGAAATTCAAGAAAGTCTGATGCGTACCCGTTTGGTGCCATTTGATCGTTTG
TTACCACGTTTACAACGTATTGTGCGTCAAACCTCTTCGACCTTGAACCGTCCTGCAGAATTGATTGTTCAAAATACAGA
AGGTGAATTGGACCGTACGATCTTAGAGCGTTTGGTGACACCATTTGAACATATGCTGCGTAATGCGGTCGACCATGGTT
TAGAAGATCCTGCTGACCGTTTGGCTTTGAAAAAGCCAGAAGTGGGTAGCATTGTCTTGAATATTAGTCGTCAGGGTACC
GATGTGCTGGTGTCTTTCAGTGATGATGGTAAAGGGATTGATGAAGCCAAGATTAAAGACAAAGCCTTAAAACTTGGTTT
AATCAAAGCAGATCAGTTCCTCGATAAACAAGAAATCTTGCAATTGATCTTCCATCCAGGTTTCTCAACGGCACAAGCGG
TAACGCAAATTTCGGGTCGTGGTGTTGGTCTGGATGTGGTGCAAAGTGAAATTAAAGCCTTGGGTGGTCATGTTTCCGTT
GAGTCTGAGTTAGGTAAAGGGACGACCTTTACCATTCGTGTACCAACGACGGTAGCCGTCAGCGATGCCTTGATGGTGAA
AGCCGGCGATCAACAATACGCAATTTCGTTAGCGCAAATTGAACGTATTGTCCGTATTGCACCGACGGCACTCGAAACTT
ACTTCAATAGTAAGGATGACGTGTTTAAAATTGACAACACCAATTACAAACTACGTTATCTATCAGAGTTTGTGGGTAAT
CAGCCAATTCCACGTTTAAATAATGTTGGCCATTCATTGCCTGTATTGCTAATAAAAGGCAACAGTGGTCAAACCATTGC
TTTATTGGTAGATCAGCTGGTGGGTTCACGTTCTCAAATCGTGGTGAAACCAATTGGTCAACAATTTACCAGTGTGGCCG
CGATTGCAGGTGCCACGATTCTAGGTGATGGTCATGTATGTTTGATTTTGGATGGGCAAAATATTGCACGTCAAATTCAA
ACTACGCAGCGTGTTAAACATTCAGCTGAACAGCGTGATTTGGGCCGTCAAGCCAATGCGCGTCGTTTAGTGATGATTGT
CGATGACTCGGTGACAGTACGTAAGGTGACTTCACGCTTACTTGAACGTCAAGGTTATGACATCGTGACAGCGAAAGATG
GTGTGGATGCAATTGAACAGCTTGAAAATGTCCGTCCAGACTTGATGCTACTCGATATTGAAATGCCACGTATGGATGGT
TTCGAAGTGACAAACTTAGTCCGTCACCATGACATTCACCGTGACTTGCCAATCATTATGATTACATCGCGTACAGGTGA
AAAACATCGTGAGCGTGCATTTAGCTTAGGTGTGACTCACTATATGGGTAAACCATTCCAAGAAGCTGAATTGCTTGCCA
ATATTGAAGCTTTAATTGCAGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.656

100

0.615