Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | TAO_RS02955 | Genome accession | NZ_AP014836 |
| Coordinates | 617356..618687 (+) | Length | 443 a.a. |
| NCBI ID | WP_096526546.1 | Uniprot ID | A0A1Q2SLE9 |
| Organism | Candidatus Nitrosoglobus terrae strain TAO100 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 612356..623687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TAO_RS02935 (TAO_0576) | suhB | 612801..613604 (+) | 804 | WP_096526542.1 | inositol-1-monophosphatase | - |
| TAO_RS02940 (TAO_0577) | typA | 613661..615490 (+) | 1830 | WP_096526543.1 | translational GTPase TypA | - |
| TAO_RS02945 (TAO_0578) | - | 615495..615728 (+) | 234 | WP_096526544.1 | PP0621 family protein | - |
| TAO_RS02950 (TAO_0579) | - | 615743..617359 (+) | 1617 | WP_096526545.1 | nitrogen regulation protein NR(II) | - |
| TAO_RS02955 (TAO_0580) | pilR | 617356..618687 (+) | 1332 | WP_096526546.1 | sigma-54 dependent transcriptional regulator | Regulator |
| TAO_RS02960 (TAO_0581) | - | 619142..619624 (+) | 483 | WP_096526547.1 | pilin | - |
| TAO_RS02965 (TAO_0582) | - | 619723..620208 (+) | 486 | WP_172419052.1 | pilin | - |
| TAO_RS02970 (TAO_0583) | - | 620227..620670 (-) | 444 | WP_096526549.1 | DUF29 domain-containing protein | - |
| TAO_RS02975 (TAO_0584) | - | 620708..621130 (-) | 423 | WP_096526550.1 | DUF29 domain-containing protein | - |
| TAO_RS02980 (TAO_0585) | - | 621167..621607 (-) | 441 | WP_096526551.1 | DUF29 domain-containing protein | - |
| TAO_RS02985 (TAO_0586) | - | 621657..622097 (-) | 441 | WP_096526552.1 | DUF29 domain-containing protein | - |
| TAO_RS02990 (TAO_0587) | - | 622520..622981 (-) | 462 | WP_096526553.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 443 a.a. Molecular weight: 48638.19 Da Isoelectric Point: 7.2255
>NTDB_id=67004 TAO_RS02955 WP_096526546.1 617356..618687(+) (pilR) [Candidatus Nitrosoglobus terrae strain TAO100]
MRTSPLALIVDDEPDILALLELTLAPMGIRCQKAANLEQAQQCLQQQGFNLCLTDMRLPDGDGITLVKHINQAYPQLPVA
VITAHGNVEAAVTALKSGAFDFISKPVDLGTLRNLVNTALKLPSTYPQKERRTRHQLLGESPPMRVVRAQIAKLARSQAP
VYISGESGTGKELVARLIHAQSPRSAGPFVPVNCGAIPDSLLESEFFGYEKGSFTGAHRDKAGLFQSSEGGTLFLDEVGD
LSLAMQVKLLRAIQERAVRPLGSASEISVDVRILSATHQDLALLVKRGEFRQDLFYRLNIIELPLPPLRARSTDIPALAD
HILTRLAATNQMICPQLTPEALAKLQAYHFPGNVRELENILERALILREEELIQVEDLQLPVTSHGLSSTLTVDSLENRL
ESVEKQAILHALAQTGYNKTAAAKLLGITFRALRYRLKKLDLE
MRTSPLALIVDDEPDILALLELTLAPMGIRCQKAANLEQAQQCLQQQGFNLCLTDMRLPDGDGITLVKHINQAYPQLPVA
VITAHGNVEAAVTALKSGAFDFISKPVDLGTLRNLVNTALKLPSTYPQKERRTRHQLLGESPPMRVVRAQIAKLARSQAP
VYISGESGTGKELVARLIHAQSPRSAGPFVPVNCGAIPDSLLESEFFGYEKGSFTGAHRDKAGLFQSSEGGTLFLDEVGD
LSLAMQVKLLRAIQERAVRPLGSASEISVDVRILSATHQDLALLVKRGEFRQDLFYRLNIIELPLPPLRARSTDIPALAD
HILTRLAATNQMICPQLTPEALAKLQAYHFPGNVRELENILERALILREEELIQVEDLQLPVTSHGLSSTLTVDSLENRL
ESVEKQAILHALAQTGYNKTAAAKLLGITFRALRYRLKKLDLE
Nucleotide
Download Length: 1332 bp
>NTDB_id=67004 TAO_RS02955 WP_096526546.1 617356..618687(+) (pilR) [Candidatus Nitrosoglobus terrae strain TAO100]
ATGAGGACTTCACCCCTAGCCCTCATTGTTGATGATGAGCCAGATATCCTAGCTCTGCTGGAGCTAACCCTCGCCCCCAT
GGGGATCCGCTGCCAAAAAGCCGCCAATCTTGAACAGGCGCAGCAATGCCTCCAGCAGCAAGGGTTTAATTTGTGCCTGA
CGGATATGCGCTTACCCGATGGAGATGGGATTACGCTGGTGAAACACATTAATCAGGCGTATCCCCAACTGCCTGTTGCC
GTCATCACCGCCCACGGCAATGTGGAAGCGGCGGTCACGGCGTTAAAATCTGGGGCGTTTGATTTTATTTCCAAACCAGT
GGATCTGGGCACTCTCCGTAATTTGGTCAACACCGCCCTGAAATTGCCCTCCACCTATCCGCAAAAAGAGCGCCGGACTC
GCCACCAACTACTAGGGGAATCCCCTCCCATGCGGGTCGTGCGCGCCCAGATTGCTAAATTAGCCCGCAGCCAAGCGCCA
GTTTATATTAGTGGTGAATCTGGCACCGGCAAAGAGCTAGTGGCGCGGCTCATCCACGCCCAAAGCCCACGTTCGGCAGG
GCCGTTTGTACCTGTCAACTGTGGCGCTATCCCGGATTCTTTGCTGGAAAGTGAATTTTTTGGCTATGAAAAAGGCAGTT
TTACCGGCGCTCATCGAGACAAGGCGGGATTATTTCAGAGTTCTGAAGGGGGTACGCTGTTTTTAGATGAAGTGGGGGAT
TTATCCTTAGCTATGCAGGTGAAACTATTGCGCGCCATTCAAGAGCGAGCGGTACGGCCTTTGGGAAGTGCGAGTGAAAT
CTCAGTAGATGTTCGCATTCTCTCCGCCACTCATCAAGATCTGGCGTTATTAGTTAAGCGGGGAGAATTTCGTCAAGATC
TGTTCTATCGGCTGAATATTATTGAGCTGCCTCTGCCGCCCTTAAGAGCGCGATCAACGGATATCCCCGCCTTGGCAGAT
CATATCCTTACGCGGCTAGCGGCCACGAATCAAATGATCTGTCCCCAACTCACCCCCGAAGCGCTGGCAAAACTCCAAGC
CTATCATTTTCCTGGGAATGTGCGGGAGCTAGAAAATATCTTGGAACGGGCGCTGATTTTGCGGGAAGAGGAATTGATTC
AGGTGGAGGATCTCCAGTTACCGGTAACTAGCCATGGCCTTAGTTCAACTCTTACGGTTGATTCCTTAGAAAACCGGCTT
GAATCTGTGGAAAAACAAGCCATCCTCCACGCTTTAGCCCAGACCGGCTATAACAAAACCGCGGCGGCTAAATTGTTGGG
GATCACGTTTCGCGCCCTGCGCTATCGGCTGAAAAAATTGGATCTGGAATAA
ATGAGGACTTCACCCCTAGCCCTCATTGTTGATGATGAGCCAGATATCCTAGCTCTGCTGGAGCTAACCCTCGCCCCCAT
GGGGATCCGCTGCCAAAAAGCCGCCAATCTTGAACAGGCGCAGCAATGCCTCCAGCAGCAAGGGTTTAATTTGTGCCTGA
CGGATATGCGCTTACCCGATGGAGATGGGATTACGCTGGTGAAACACATTAATCAGGCGTATCCCCAACTGCCTGTTGCC
GTCATCACCGCCCACGGCAATGTGGAAGCGGCGGTCACGGCGTTAAAATCTGGGGCGTTTGATTTTATTTCCAAACCAGT
GGATCTGGGCACTCTCCGTAATTTGGTCAACACCGCCCTGAAATTGCCCTCCACCTATCCGCAAAAAGAGCGCCGGACTC
GCCACCAACTACTAGGGGAATCCCCTCCCATGCGGGTCGTGCGCGCCCAGATTGCTAAATTAGCCCGCAGCCAAGCGCCA
GTTTATATTAGTGGTGAATCTGGCACCGGCAAAGAGCTAGTGGCGCGGCTCATCCACGCCCAAAGCCCACGTTCGGCAGG
GCCGTTTGTACCTGTCAACTGTGGCGCTATCCCGGATTCTTTGCTGGAAAGTGAATTTTTTGGCTATGAAAAAGGCAGTT
TTACCGGCGCTCATCGAGACAAGGCGGGATTATTTCAGAGTTCTGAAGGGGGTACGCTGTTTTTAGATGAAGTGGGGGAT
TTATCCTTAGCTATGCAGGTGAAACTATTGCGCGCCATTCAAGAGCGAGCGGTACGGCCTTTGGGAAGTGCGAGTGAAAT
CTCAGTAGATGTTCGCATTCTCTCCGCCACTCATCAAGATCTGGCGTTATTAGTTAAGCGGGGAGAATTTCGTCAAGATC
TGTTCTATCGGCTGAATATTATTGAGCTGCCTCTGCCGCCCTTAAGAGCGCGATCAACGGATATCCCCGCCTTGGCAGAT
CATATCCTTACGCGGCTAGCGGCCACGAATCAAATGATCTGTCCCCAACTCACCCCCGAAGCGCTGGCAAAACTCCAAGC
CTATCATTTTCCTGGGAATGTGCGGGAGCTAGAAAATATCTTGGAACGGGCGCTGATTTTGCGGGAAGAGGAATTGATTC
AGGTGGAGGATCTCCAGTTACCGGTAACTAGCCATGGCCTTAGTTCAACTCTTACGGTTGATTCCTTAGAAAACCGGCTT
GAATCTGTGGAAAAACAAGCCATCCTCCACGCTTTAGCCCAGACCGGCTATAACAAAACCGCGGCGGCTAAATTGTTGGG
GATCACGTTTCGCGCCCTGCGCTATCGGCTGAAAAAATTGGATCTGGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
60.633 |
99.774 |
0.605 |
| pilR | Acinetobacter baumannii strain A118 |
49.892 |
100 |
0.519 |