Detailed information NTG0670009

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIE42_RS22135
• Genome accession: NZ_CP109038
• Coordinates: 4999015..5000307 (+)
• Length: 430 a.a.
• NCBI ID: WP_371652718.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00648
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4994015..5005307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE42_RS22120 (OIE42_22105)	tig	4995763..4997151 (+)	1389	WP_406344541.1	trigger factor	-
OIE42_RS22125 (OIE42_22110)	clpP	4997484..4998101 (+)	618	WP_361386536.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE42_RS22130 (OIE42_22115)	clpP	4998181..4998858 (+)	678	WP_306822805.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE42_RS22135 (OIE42_22120)	clpX	4999015..5000307 (+)	1293	WP_371652718.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIE42_RS22140 (OIE42_22125)	-	5000385..5001323 (-)	939	WP_406344543.1	hypothetical protein	-
OIE42_RS22145 (OIE42_22130)	-	5001463..5004087 (+)	2625	WP_406344545.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47100.96 Da
• Isoelectric Point: 4.8809

>NTDB_id=670009 OIE42_RS22135 WP_371652718.1 4999015..5000307(+) (clpX) [Streptomyces sp. NBC_00648]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVHNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=670009 OIE42_RS22135 WP_371652718.1 4999015..5000307(+) (clpX) [Streptomyces sp. NBC_00648]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGTCCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTGGAGAGCTACGTGGTGGGCCAGGAGCCC
GCCAAGAAGGCGCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGACGGGCCG
GGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTCGCCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCGGGGTACGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TCCTGAAGATCCTGGAGGGCACGACGGCATCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGTCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCCGTCCTCACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACGGGGGCGCGCGGTCTGC
GCGCGATCATGGAGGAAGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
TCGGACGTCGTCCACAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGCATCGTGAAGAACGACGGGCGGCACGA
GAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.488	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512