Detailed information NTG0669841

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG696_RS27255
• Genome accession: NZ_CP109033
• Coordinates: 6260744..6262042 (+)
• Length: 432 a.a.
• NCBI ID: WP_148018684.1
• Uniprot ID: A0ABY9IW47
• Organism: Streptomyces sp. NBC_00656 strain NBC 00656
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6255744..6267042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG696_RS27225 (OG696_27225)	-	6256784..6256978 (+)	195	WP_219569646.1	hypothetical protein	-
OG696_RS27240 (OG696_27240)	tig	6257557..6258951 (+)	1395	WP_219569644.1	trigger factor	-
OG696_RS27245 (OG696_27245)	-	6259218..6259823 (+)	606	WP_168713553.1	ATP-dependent Clp protease proteolytic subunit	-
OG696_RS27250 (OG696_27250)	clpP	6259904..6260587 (+)	684	WP_306070064.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG696_RS27255 (OG696_27255)	clpX	6260744..6262042 (+)	1299	WP_148018684.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG696_RS27260 (OG696_27260)	-	6262793..6263761 (-)	969	WP_306070063.1	hypothetical protein	-
OG696_RS27265 (OG696_27265)	-	6263901..6266522 (+)	2622	WP_219569640.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47403.23 Da
• Isoelectric Point: 4.8390

>NTDB_id=669841 OG696_RS27255 WP_148018684.1 6260744..6262042(+) (clpX) [Streptomyces sp. NBC_00656 strain NBC 00656]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDEGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=669841 OG696_RS27255 WP_148018684.1 6260744..6262042(+) (clpX) [Streptomyces sp. NBC_00656 strain NBC 00656]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGGCGCGAACCG
CGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCAGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGCCGGAAGCACCCGCATCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTCGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGAGTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGTGACGAGGGGCG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516