Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG970_RS27335 Genome accession   NZ_CP109032
Coordinates   6036680..6037804 (-) Length   374 a.a.
NCBI ID   WP_266830670.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00658     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6031680..6042804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG970_RS27310 (OG970_27320) cseB 6032170..6032886 (-) 717 WP_266456953.1 two-component system response regulator CseB -
  OG970_RS27315 (OG970_27325) - 6032926..6033594 (-) 669 WP_406354423.1 hypothetical protein -
  OG970_RS27320 (OG970_27330) - 6033657..6034208 (-) 552 WP_266456951.1 SigE family RNA polymerase sigma factor -
  OG970_RS27325 (OG970_27335) - 6034497..6035411 (-) 915 WP_406354424.1 A/G-specific adenine glycosylase -
  OG970_RS27330 (OG970_27340) - 6035759..6036586 (+) 828 WP_266456947.1 hypothetical protein -
  OG970_RS27335 (OG970_27345) disA 6036680..6037804 (-) 1125 WP_266830670.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG970_RS27340 (OG970_27350) radA/sms 6037876..6039285 (-) 1410 WP_406354426.1 DNA repair protein RadA Machinery gene
  OG970_RS27345 (OG970_27355) - 6039493..6041364 (+) 1872 WP_406354428.1 BACON domain-containing protein -
  OG970_RS27350 (OG970_27360) - 6041398..6042237 (-) 840 WP_371598990.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40147.92 Da        Isoelectric Point: 5.0095

>NTDB_id=669732 OG970_RS27335 WP_266830670.1 6036680..6037804(-) (disA) [Streptomyces sp. NBC_00658]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELHALTHAELLELPTVARALGYTGSPEALDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=669732 OG970_RS27335 WP_266830670.1 6036680..6037804(-) (disA) [Streptomyces sp. NBC_00658]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAGCGGATCCTCCGCGGCAACACCGGAGGACTCATCGTGC
TCGGGTCCGACAAGACCGTCGAGGCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTGCAACTGGTGCC
CGACCCGACCATCCCGACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGACTTCACGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGCCAGCGCCGCGTCCTCGAAGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAACTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCCCTCGAGATCGAGGACCTGGTCACGGTCCGCGATGTCTCGGCGGTGGCCCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGCACCGACGGGCGCCTTCTCGCGCTCCAGCTCGACGAGTTGATCGCC
GGCGTCGAACCCGAGCGTGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTCTCCGAGCTGCACGCGCTCACCCACGCCGAGCTGCTCGAACTCCCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTACCGCCTCCTCGCGAAGGTGCCCCGCCTGCCCGGCGCG
ATCATCGACCGCCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTCCGCGAGGGTCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433