Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MQW34_RS21225 | Genome accession | NZ_CP094455 |
| Coordinates | 4112427..4113470 (-) | Length | 347 a.a. |
| NCBI ID | WP_078420377.1 | Uniprot ID | - |
| Organism | Bacillus sp. ZJS3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4107427..4118470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MQW34_RS21180 (MQW34_21215) | - | 4107854..4108054 (-) | 201 | WP_000106081.1 | YqzE family protein | - |
| MQW34_RS21185 (MQW34_21220) | aroK | 4108093..4108590 (-) | 498 | WP_210627889.1 | shikimate kinase AroK | - |
| MQW34_RS21190 (MQW34_21225) | - | 4108711..4109361 (-) | 651 | WP_243498389.1 | 2OG-Fe(II) oxygenase | - |
| MQW34_RS21195 (MQW34_21230) | comGG | 4109537..4109908 (-) | 372 | WP_078420379.1 | competence type IV pilus minor pilin ComGG | - |
| MQW34_RS21200 (MQW34_21235) | comGF | 4109905..4110375 (-) | 471 | WP_139365551.1 | competence type IV pilus minor pilin ComGF | - |
| MQW34_RS21205 (MQW34_21240) | comGE | 4110345..4110647 (-) | 303 | WP_139365552.1 | competence type IV pilus minor pilin ComGE | - |
| MQW34_RS21210 (MQW34_21245) | comGD | 4110640..4111095 (-) | 456 | WP_000810395.1 | comG operon protein ComGD | - |
| MQW34_RS21215 (MQW34_21250) | comGC | 4111092..4111391 (-) | 300 | WP_001178696.1 | comG operon protein ComGC | - |
| MQW34_RS21220 (MQW34_21255) | comGB | 4111403..4112434 (-) | 1032 | WP_078420378.1 | comG operon protein ComGB | - |
| MQW34_RS21225 (MQW34_21260) | comGA | 4112427..4113470 (-) | 1044 | WP_078420377.1 | competence protein ComGA | Machinery gene |
| MQW34_RS21230 (MQW34_21265) | - | 4113676..4114371 (+) | 696 | WP_000434108.1 | helix-turn-helix transcriptional regulator | - |
| MQW34_RS21235 (MQW34_21270) | - | 4114496..4114738 (+) | 243 | WP_243498391.1 | DUF2626 domain-containing protein | - |
| MQW34_RS21240 (MQW34_21275) | - | 4114846..4116240 (+) | 1395 | WP_001094339.1 | L-cystine transporter | - |
| MQW34_RS21245 (MQW34_21280) | - | 4116470..4116877 (-) | 408 | WP_098667303.1 | hypothetical protein | - |
| MQW34_RS21250 (MQW34_21285) | - | 4116965..4117180 (-) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| MQW34_RS21255 (MQW34_21290) | - | 4117433..4117744 (+) | 312 | WP_078420376.1 | hypothetical protein | - |
| MQW34_RS21260 (MQW34_21295) | - | 4117781..4118269 (-) | 489 | WP_139365304.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39277.74 Da Isoelectric Point: 9.0210
>NTDB_id=669650 MQW34_RS21225 WP_078420377.1 4112427..4113470(-) (comGA) [Bacillus sp. ZJS3]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKQYIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDILQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCQKKCSTVCKSMRQVRQASIYELLYGYELKQAIKGANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKQYIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDILQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCQKKCSTVCKSMRQVRQASIYELLYGYELKQAIKGANGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=669650 MQW34_RS21225 WP_078420377.1 4112427..4113470(-) (comGA) [Bacillus sp. ZJS3]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTAAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAACTACGTATAGGAAAAGATTTAATGACGAAACAATACATTGAAAAGGAATTTGGAG
AAAAACTCGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGCCTTTCCACGCTTCCAACCGTATATCAAGAAAGTCTCGTTATTCGTTT
ACATTTACAAGCATCTGTTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATTGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATATATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCAAAAATTGCAATAAGAGCAAGTTTGACTGGACATTTAGTAATGACAACACTGCAT
ACGAATGATGCGAAAGGAGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAGATTGAACAATCTTTATTGGC
TATAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCCAAAAAAAGTGCTCAACTGTATGTAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAATTAAAACAAGCGATTAAAGGAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACGTTAGAATCTTCGATACGGAAAGGATACGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTAAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAACTACGTATAGGAAAAGATTTAATGACGAAACAATACATTGAAAAGGAATTTGGAG
AAAAACTCGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGCCTTTCCACGCTTCCAACCGTATATCAAGAAAGTCTCGTTATTCGTTT
ACATTTACAAGCATCTGTTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATTGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATATATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCAAAAATTGCAATAAGAGCAAGTTTGACTGGACATTTAGTAATGACAACACTGCAT
ACGAATGATGCGAAAGGAGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAGATTGAACAATCTTTATTGGC
TATAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCCAAAAAAAGTGCTCAACTGTATGTAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAATTAAAACAAGCGATTAAAGGAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACGTTAGAATCTTCGATACGGAAAGGATACGCTTTAGGATTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.637 |
100 |
0.576 |