Detailed information NTG0669542

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MRY16_RS07165
• Genome accession: NZ_CP094445
• Coordinates: 1514575..1515303 (+)
• Length: 242 a.a.
• NCBI ID: WP_243484779.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain A2-1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1509575..1520303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRY16_RS07130 (MRY16_07130)	kdsB	1509767..1510528 (+)	762	WP_243484773.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MRY16_RS07135 (MRY16_07135)	-	1510530..1511516 (+)	987	WP_243484774.1	DNA polymerase III subunit delta'	-
MRY16_RS07140 (MRY16_07140)	-	1511743..1512087 (+)	345	WP_243484776.1	PilZ domain-containing protein	-
MRY16_RS07145 (MRY16_07145)	-	1512110..1512883 (+)	774	WP_243484778.1	TatD family hydrolase	-
MRY16_RS07150 (MRY16_07150)	-	1512922..1513530 (+)	609	WP_020899852.1	TetR/AcrR family transcriptional regulator	-
MRY16_RS07155 (MRY16_07155)	-	1513543..1514091 (+)	549	WP_039047968.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
MRY16_RS07160 (MRY16_07160)	xcpV	1514225..1514578 (+)	354	WP_051067837.1	type II secretion system protein	Machinery gene
MRY16_RS07165 (MRY16_07165)	xcpW	1514575..1515303 (+)	729	WP_243484779.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MRY16_RS07170 (MRY16_07170)	gspK	1515300..1516259 (+)	960	WP_243484781.1	type II secretion system minor pseudopilin GspK	-
MRY16_RS07175 (MRY16_07175)	-	1516366..1516962 (+)	597	WP_099948595.1	6-carboxytetrahydropterin synthase	-
MRY16_RS07180 (MRY16_07180)	ung	1517001..1517714 (+)	714	WP_004911491.1	uracil-DNA glycosylase	-
MRY16_RS07185 (MRY16_07185)	-	1517711..1518835 (+)	1125	WP_171065587.1	enoyl-CoA hydratase/isomerase family protein	-
MRY16_RS07190 (MRY16_07190)	tadA	1518842..1519345 (+)	504	WP_125299265.1	tRNA adenosine(34) deaminase TadA	-
MRY16_RS07195 (MRY16_07195)	-	1519413..1519853 (+)	441	WP_075696895.1	SRPBCC family protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 27932.32 Da
• Isoelectric Point: 9.7964

>NTDB_id=669542 MRY16_RS07165 WP_243484779.1 1514575..1515303(+) (xcpW) [Acinetobacter junii strain A2-1]
MKIKNVVMRLGFRFNVVSECQQSSTKSYLPKKIKSNLGFTLVELLVAIAIFAVLSMLGWKVFAYLIKVKDRNAEHETHLF
ELQDAYQQFLKDSMQIIPLTTNDGRQLQAAMVLNDRSFSFSKAGVSDPLKQGLSPYERIEYRYDAQQKKVYRLKYTNLNI
PNRVQPVSSTLLKNVDQFRIVILNPQEISQWPENINDPNNVNELKKLPLGFKVQLTIAGSDYEWIYSLLNVNQLLVNQET
PQ

Nucleotide

• Length: 729 bp

>NTDB_id=669542 MRY16_RS07165 WP_243484779.1 1514575..1515303(+) (xcpW) [Acinetobacter junii strain A2-1]
ATGAAAATCAAGAATGTTGTAATGAGGTTGGGTTTCAGATTTAATGTTGTCTCAGAATGTCAGCAAAGTTCAACTAAGTC
TTATTTACCAAAAAAAATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATTTTTGCAGTGC
TTTCAATGTTGGGGTGGAAAGTTTTTGCTTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTT
GAATTACAGGATGCTTATCAGCAATTTTTAAAAGATAGCATGCAGATAATTCCATTGACTACAAATGATGGGCGACAATT
ACAAGCAGCTATGGTTTTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTGGGGTATCCGATCCATTGAAGCAAGGTCTTT
CACCATATGAGCGAATAGAATACAGATATGATGCACAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATT
CCAAATCGTGTGCAACCAGTATCAAGCACATTACTTAAAAATGTAGATCAATTTAGAATTGTGATTTTAAATCCACAAGA
AATTAGCCAATGGCCTGAAAATATTAATGATCCAAATAATGTAAATGAATTAAAGAAGTTACCATTAGGTTTTAAAGTTC
AATTGACGATTGCTGGATCAGATTATGAGTGGATTTATAGTTTATTAAATGTCAATCAGTTATTGGTCAATCAGGAAACA
CCTCAATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (34-57)

• Type II secretion system (T2SS), protein J (T2SSJ) (91-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	69.307	83.471	0.579