Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | MRY16_RS07160 | Genome accession | NZ_CP094445 |
| Coordinates | 1514225..1514578 (+) | Length | 117 a.a. |
| NCBI ID | WP_051067837.1 | Uniprot ID | - |
| Organism | Acinetobacter junii strain A2-1 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1509225..1519578
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MRY16_RS07130 (MRY16_07130) | kdsB | 1509767..1510528 (+) | 762 | WP_243484773.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| MRY16_RS07135 (MRY16_07135) | - | 1510530..1511516 (+) | 987 | WP_243484774.1 | DNA polymerase III subunit delta' | - |
| MRY16_RS07140 (MRY16_07140) | - | 1511743..1512087 (+) | 345 | WP_243484776.1 | PilZ domain-containing protein | - |
| MRY16_RS07145 (MRY16_07145) | - | 1512110..1512883 (+) | 774 | WP_243484778.1 | TatD family hydrolase | - |
| MRY16_RS07150 (MRY16_07150) | - | 1512922..1513530 (+) | 609 | WP_020899852.1 | TetR/AcrR family transcriptional regulator | - |
| MRY16_RS07155 (MRY16_07155) | - | 1513543..1514091 (+) | 549 | WP_039047968.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| MRY16_RS07160 (MRY16_07160) | xcpV | 1514225..1514578 (+) | 354 | WP_051067837.1 | type II secretion system protein | Machinery gene |
| MRY16_RS07165 (MRY16_07165) | xcpW | 1514575..1515303 (+) | 729 | WP_243484779.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| MRY16_RS07170 (MRY16_07170) | gspK | 1515300..1516259 (+) | 960 | WP_243484781.1 | type II secretion system minor pseudopilin GspK | - |
| MRY16_RS07175 (MRY16_07175) | - | 1516366..1516962 (+) | 597 | WP_099948595.1 | 6-carboxytetrahydropterin synthase | - |
| MRY16_RS07180 (MRY16_07180) | ung | 1517001..1517714 (+) | 714 | WP_004911491.1 | uracil-DNA glycosylase | - |
| MRY16_RS07185 (MRY16_07185) | - | 1517711..1518835 (+) | 1125 | WP_171065587.1 | enoyl-CoA hydratase/isomerase family protein | - |
| MRY16_RS07190 (MRY16_07190) | tadA | 1518842..1519345 (+) | 504 | WP_125299265.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 117 a.a. Molecular weight: 12970.95 Da Isoelectric Point: 9.4883
>NTDB_id=669541 MRY16_RS07160 WP_051067837.1 1514225..1514578(+) (xcpV) [Acinetobacter junii strain A2-1]
MVALAIFAVAAIALTKIAMQYTQSTSNAILRTKAQFVAMNEIATMEINQEWLEGTQSKQVTAQGETWQIDKKAQSTLSPK
IQRIELQVSLYNTEQGKVEAGITNLVFFNYPAKVKTS
MVALAIFAVAAIALTKIAMQYTQSTSNAILRTKAQFVAMNEIATMEINQEWLEGTQSKQVTAQGETWQIDKKAQSTLSPK
IQRIELQVSLYNTEQGKVEAGITNLVFFNYPAKVKTS
Nucleotide
Download Length: 354 bp
>NTDB_id=669541 MRY16_RS07160 WP_051067837.1 1514225..1514578(+) (xcpV) [Acinetobacter junii strain A2-1]
ATGGTTGCTTTAGCTATTTTTGCGGTCGCTGCAATTGCGTTAACTAAAATAGCTATGCAGTATACTCAGTCAACTTCAAA
TGCAATTTTACGTACTAAAGCCCAATTTGTTGCAATGAATGAAATTGCAACCATGGAAATAAATCAAGAGTGGCTTGAGG
GAACACAATCTAAACAAGTGACTGCGCAGGGAGAAACTTGGCAAATCGATAAAAAAGCACAATCAACATTAAGCCCAAAA
ATCCAACGTATCGAGTTACAAGTAAGTTTATATAACACTGAACAAGGCAAAGTTGAGGCAGGAATTACCAATCTTGTATT
CTTTAATTATCCTGCAAAAGTCAAAACATCATGA
ATGGTTGCTTTAGCTATTTTTGCGGTCGCTGCAATTGCGTTAACTAAAATAGCTATGCAGTATACTCAGTCAACTTCAAA
TGCAATTTTACGTACTAAAGCCCAATTTGTTGCAATGAATGAAATTGCAACCATGGAAATAAATCAAGAGTGGCTTGAGG
GAACACAATCTAAACAAGTGACTGCGCAGGGAGAAACTTGGCAAATCGATAAAAAAGCACAATCAACATTAAGCCCAAAA
ATCCAACGTATCGAGTTACAAGTAAGTTTATATAACACTGAACAAGGCAAAGTTGAGGCAGGAATTACCAATCTTGTATT
CTTTAATTATCCTGCAAAAGTCAAAACATCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
80.87 |
98.291 |
0.795 |