Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | MRY16_RS01470 | Genome accession | NZ_CP094445 |
| Coordinates | 320008..320475 (+) | Length | 155 a.a. |
| NCBI ID | WP_099948003.1 | Uniprot ID | - |
| Organism | Acinetobacter junii strain A2-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 315008..325475
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MRY16_RS01460 (MRY16_01460) | - | 315515..316294 (+) | 780 | WP_099948001.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| MRY16_RS01465 (MRY16_01465) | - | 316308..320000 (+) | 3693 | WP_243483897.1 | hypothetical protein | - |
| MRY16_RS01470 (MRY16_01470) | comE | 320008..320475 (+) | 468 | WP_099948003.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| MRY16_RS01475 (MRY16_01475) | - | 320469..320948 (+) | 480 | WP_243483899.1 | type IV pilin protein | - |
| MRY16_RS01480 (MRY16_01480) | rpsP | 321165..321422 (+) | 258 | WP_004964546.1 | 30S ribosomal protein S16 | - |
| MRY16_RS01485 (MRY16_01485) | rimM | 321439..321987 (+) | 549 | WP_161418489.1 | ribosome maturation factor RimM | - |
| MRY16_RS01490 (MRY16_01490) | trmD | 322030..322770 (+) | 741 | WP_112986468.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| MRY16_RS01495 (MRY16_01495) | rplS | 323001..323372 (+) | 372 | WP_004660214.1 | 50S ribosomal protein L19 | - |
| MRY16_RS01500 (MRY16_01500) | - | 323434..324408 (-) | 975 | WP_243483901.1 | triacylglycerol lipase | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 16795.19 Da Isoelectric Point: 9.6568
>NTDB_id=669530 MRY16_RS01470 WP_099948003.1 320008..320475(+) (comE) [Acinetobacter junii strain A2-1]
MNKNDGFTLIELMVVLIIIAIIAAIAIPSYQSYARRALAAQMQQEMQRISVLLERHKARNFSYKGFDLSTQGVVAPRTYS
FDLKDAATTTTAAKGSGNGKLLSATDASGRSWVLYGITSDAQNYNFLMTSTGLRCKNKTAANVVSTGCGTGEEPW
MNKNDGFTLIELMVVLIIIAIIAAIAIPSYQSYARRALAAQMQQEMQRISVLLERHKARNFSYKGFDLSTQGVVAPRTYS
FDLKDAATTTTAAKGSGNGKLLSATDASGRSWVLYGITSDAQNYNFLMTSTGLRCKNKTAANVVSTGCGTGEEPW
Nucleotide
Download Length: 468 bp
>NTDB_id=669530 MRY16_RS01470 WP_099948003.1 320008..320475(+) (comE) [Acinetobacter junii strain A2-1]
ATGAACAAAAATGATGGTTTCACCCTGATTGAATTGATGGTAGTTCTTATAATTATTGCGATCATAGCTGCCATCGCAAT
ACCCTCATATCAATCTTATGCTCGACGTGCGCTTGCTGCTCAAATGCAGCAAGAAATGCAACGTATCTCTGTGCTACTAG
AGCGTCATAAAGCACGTAATTTTAGTTACAAGGGCTTCGATTTATCTACTCAAGGTGTTGTTGCACCTCGAACTTATAGC
TTTGATCTAAAGGATGCTGCAACTACTACTACAGCAGCCAAAGGCTCAGGTAATGGTAAATTACTTTCAGCTACTGATGC
CTCAGGACGTTCTTGGGTTTTATATGGAATAACTTCTGATGCTCAAAACTATAACTTTCTAATGACGAGTACTGGCTTAC
GTTGTAAAAATAAAACAGCTGCGAATGTAGTCTCGACAGGATGTGGTACGGGAGAGGAGCCATGGTAA
ATGAACAAAAATGATGGTTTCACCCTGATTGAATTGATGGTAGTTCTTATAATTATTGCGATCATAGCTGCCATCGCAAT
ACCCTCATATCAATCTTATGCTCGACGTGCGCTTGCTGCTCAAATGCAGCAAGAAATGCAACGTATCTCTGTGCTACTAG
AGCGTCATAAAGCACGTAATTTTAGTTACAAGGGCTTCGATTTATCTACTCAAGGTGTTGTTGCACCTCGAACTTATAGC
TTTGATCTAAAGGATGCTGCAACTACTACTACAGCAGCCAAAGGCTCAGGTAATGGTAAATTACTTTCAGCTACTGATGC
CTCAGGACGTTCTTGGGTTTTATATGGAATAACTTCTGATGCTCAAAACTATAACTTTCTAATGACGAGTACTGGCTTAC
GTTGTAAAAATAAAACAGCTGCGAATGTAGTCTCGACAGGATGTGGTACGGGAGAGGAGCCATGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
45.783 |
100 |
0.49 |
| pilY2 | Acinetobacter baumannii D1279779 |
41.875 |
100 |
0.432 |