Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PM1_RS28010 Genome accession   NZ_CP094343
Coordinates   6302552..6302959 (-) Length   135 a.a.
NCBI ID   WP_009615249.1    Uniprot ID   A0A024H9X0
Organism   Pseudomonas sp. M1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6297552..6307959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PM1_RS27990 (MRY70_27990) - 6298511..6299368 (-) 858 WP_009615260.1 protein-glutamate O-methyltransferase -
  PM1_RS27995 (MRY70_27995) - 6299428..6301476 (-) 2049 WP_009615259.1 methyl-accepting chemotaxis protein -
  PM1_RS28000 (MRY70_28000) - 6301560..6302096 (-) 537 WP_009615258.1 chemotaxis protein CheW -
  PM1_RS28005 (MRY70_28005) pilH 6302142..6302507 (-) 366 WP_009615257.1 twitching motility response regulator PilH -
  PM1_RS28010 (MRY70_28010) pilG 6302552..6302959 (-) 408 WP_009615249.1 twitching motility response regulator PilG Regulator
  PM1_RS28015 (MRY70_28015) gshB 6303207..6304178 (+) 972 WP_009615248.1 glutathione synthase -
  PM1_RS28020 (MRY70_28020) - 6304263..6305156 (+) 894 WP_009615247.1 energy transducer TonB -
  PM1_RS28025 (MRY70_28025) - 6305207..6305773 (+) 567 WP_009615246.1 YqgE/AlgH family protein -
  PM1_RS28030 (MRY70_28030) ruvX 6305773..6306201 (+) 429 WP_009615245.1 Holliday junction resolvase RuvX -
  PM1_RS28035 (MRY70_28035) pyrR 6306322..6306831 (+) 510 WP_009615244.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PM1_RS28040 (MRY70_28040) - 6306870..6307874 (+) 1005 WP_009615243.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14828.19 Da        Isoelectric Point: 6.7119

>NTDB_id=669109 PM1_RS28010 WP_009615249.1 6302552..6302959(-) (pilG) [Pseudomonas sp. M1]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=669109 PM1_RS28010 WP_009615249.1 6302552..6302959(-) (pilG) [Pseudomonas sp. M1]
ATGGAACAGCATTCCGATGGTTTGAAGGTGATGGTCATCGACGATTCCAAGACGATCCGTCGTACCGCCGAAACCCTGCT
CAAGAAAGTCGGCTGCGATGTCATCACGGCCATCGATGGCTTCGACGCGCTGGCGAAGATCGCCGACACCCATCCGAACA
TCATCTTCGTCGACATCATGATGCCTCGGCTCGACGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGTATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGCGCCATCAAGACCCACGTGCCCGACTTCACCCCGGTGGAGCAAG
CTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A024H9X0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

42.063

93.333

0.393

Multiple sequence alignment