Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG506_RS26820 Genome accession   NZ_CP109004
Coordinates   6147861..6148919 (-) Length   352 a.a.
NCBI ID   WP_266776516.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00696     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6142861..6153919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG506_RS26795 (OG506_26815) cseB 6143230..6143937 (-) 708 WP_329554364.1 two-component system response regulator CseB -
  OG506_RS26800 (OG506_26820) - 6144083..6144676 (-) 594 WP_329557648.1 hypothetical protein -
  OG506_RS26805 (OG506_26825) - 6144784..6145323 (-) 540 WP_019064956.1 SigE family RNA polymerase sigma factor -
  OG506_RS26810 (OG506_26830) - 6145624..6146577 (-) 954 WP_329554365.1 A/G-specific adenine glycosylase -
  OG506_RS26815 (OG506_26835) - 6146958..6147785 (+) 828 WP_329554366.1 hypothetical protein -
  OG506_RS26820 (OG506_26840) disA 6147861..6148919 (-) 1059 WP_266776516.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG506_RS26825 (OG506_26845) radA/sms 6149057..6150466 (-) 1410 WP_266769766.1 DNA repair protein RadA Machinery gene
  OG506_RS26830 (OG506_26850) - 6150665..6152362 (+) 1698 WP_329554367.1 hypothetical protein -
  OG506_RS26835 (OG506_26855) - 6152366..6153223 (-) 858 WP_329554368.1 hypothetical protein -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 38033.68 Da        Isoelectric Point: 4.8345

>NTDB_id=668923 OG506_RS26820 WP_266776516.1 6147861..6148919(-) (disA) [Streptomyces sp. NBC_00696]
MRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFILDVEFTATRLRELCKLDGGIVVSSDLSKILRAG
VQLVPDPNIPTEETGTRHRTADRVSKQVAFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAEYVVELGTDGRLLALQLEELIAGVEPERELVVRDYVPEPTAKRS
RTVDEALAELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAIIDRLVEHFGGLQKLLAASVDD
LQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=668923 OG506_RS26820 WP_266776516.1 6147861..6148919(-) (disA) [Streptomyces sp. NBC_00696]
ATGCGCGCCTCACTGAGCGCCGTGGCCCCCGGCACGGCGTTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACGGG
CGGCCTCATCGTGCTCGGTTCCGACAAGACCGTCGAAGCGATGTGCACGGGCGGCTTCATCCTGGACGTCGAGTTCACGG
CCACGCGCCTGCGCGAACTGTGCAAGCTCGACGGCGGCATCGTGGTGTCGTCCGACCTCTCCAAGATCCTCCGGGCGGGC
GTCCAGCTGGTCCCCGACCCGAACATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGCGTCAGCAAACA
GGTCGCCTTCCCGGTGGTCTCGGTCTCCCAGTCCATGCGTCTGATCGCCCTCTACGTGGACGGCCAGCGACGCGTCCTGG
AGGACTCGGCGGCGATCCTGTCCCGCGCCAACCAGGCCCTGGCGACACTGGAGCGCTACAAACTCCGCCTGGACGAGGTG
GCGGGAACGTTGTCAGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGTCCAGCGGCTGGAGAT
GGTCCGGCTGATCGCCACCGAAATCGCCGAGTACGTAGTGGAGTTGGGCACGGACGGCCGCCTGCTCGCCCTCCAGCTGG
AGGAGTTGATCGCGGGCGTGGAGCCGGAGCGCGAACTCGTCGTACGCGACTACGTCCCCGAGCCCACGGCCAAACGATCC
CGCACGGTGGACGAGGCACTCGCCGAACTCGACGCCCTCTCCCACGCGGAACTCCTCGAACTCCCCACCGTGGCCCGCGC
GTTGGGTTACACCGGCTCCCCCGAGGCCCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTGCTGGCCAAGGTCCCGC
GCCTCCCCGGCGCGATCATCGACCGCCTGGTCGAGCACTTCGGCGGCCTGCAGAAACTCCTGGCGGCAAGCGTCGACGAC
CTGCAGACGGTCGACGGCGTGGGCGAAGCGCGAGCACGCAGCGTCCGAGAGGGCCTCTCCCGCCTGGCGGAATCCTCAAT
CCTCGAACGCTACGTCTGA

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(133-275)

Helix-hairpin-helix motif (HHH_2)

(302-337)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(16-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

98.295

0.449