Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OID55_RS22265 Genome accession   NZ_CP108990
Coordinates   5122732..5123856 (-) Length   374 a.a.
NCBI ID   WP_404116906.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00715     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5117732..5128856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OID55_RS22240 (OID55_22220) cseB 5118508..5119215 (-) 708 WP_164372951.1 two-component system response regulator CseB -
  OID55_RS22245 (OID55_22225) - 5119235..5119831 (-) 597 WP_356004489.1 hypothetical protein -
  OID55_RS22250 (OID55_22230) - 5119873..5120424 (-) 552 WP_164372953.1 SigE family RNA polymerase sigma factor -
  OID55_RS22255 (OID55_22235) - 5120686..5121603 (-) 918 WP_164372954.1 A/G-specific adenine glycosylase -
  OID55_RS22260 (OID55_22240) - 5121795..5122628 (+) 834 WP_406360983.1 hypothetical protein -
  OID55_RS22265 (OID55_22245) disA 5122732..5123856 (-) 1125 WP_404116906.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OID55_RS22270 (OID55_22250) radA/sms 5123925..5125334 (-) 1410 WP_081218648.1 DNA repair protein RadA Machinery gene
  OID55_RS22275 (OID55_22255) - 5125646..5127493 (+) 1848 WP_406360984.1 BACON domain-containing protein -
  OID55_RS22280 (OID55_22260) - 5127545..5128384 (-) 840 WP_406360985.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40128.87 Da        Isoelectric Point: 4.9234

>NTDB_id=668764 OID55_RS22265 WP_404116906.1 5122732..5123856(-) (disA) [Streptomyces sp. NBC_00715]
MAANDRAAAPGKSGGSSGADGQMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFILDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALFELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=668764 OID55_RS22265 WP_404116906.1 5122732..5123856(-) (disA) [Streptomyces sp. NBC_00715]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCAGATGCGCGCCGCACT
CAGCGCCGTGGCACCCGGTACGGCACTGCGTGACGGACTCGAACGGATCCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCGATGTGCACGGGCGGATTCATCCTGGATGTCGAGTTCACCGCGACCCGTCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAGATCCTGCGGGCGGGTGTGCAGCTGGTGCC
CGACCCCACGATCCCGACGGAGGAGACGGGTACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCGACGGCCAGCGCCGTGTCCTGGAGGACTCGGCCGCG
ATCCTGTCCCGTGCCAACCAGGCCCTCGCGACCTTGGAGCGCTACAAGCTCCGGCTGGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCTCGGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGCATCG
CGACCGAGATCGCCGAGTACGTCGTGGAGCTGGGCACCGACGGACGTCTTCTGACGCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGACCGCGAGCTGGTCGTCCGGGACTATGTGCCGGAACCGACCGCGAAGCGGTCCCGCACCGTCGACGA
GGCGCTCTTCGAGCTGGACGCGCTCAGCCACGCGGAGCTTCTCGAACTGTCCACGGTGGCAAGGGCGCTGGGTTACACCG
GTTCCCCCGAGGCGCTCGACTCGGCGGTCTCCCCGCGCGGATTCCGGCTGCTCGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTTGCCGCGAGCGTCGACGACCTCCAGGCGGTGGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCCTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436


Multiple sequence alignment