Detailed information NTG0668746

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OID55_RS14540
• Genome accession: NZ_CP108990
• Coordinates: 3336191..3337477 (-)
• Length: 428 a.a.
• NCBI ID: WP_081221566.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00715
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3331191..3342477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OID55_RS14525 (OID55_14500)	-	3331894..3334518 (-)	2625	WP_326843199.1	valine--tRNA ligase	-
OID55_RS14530 (OID55_14505)	-	3334655..3335638 (+)	984	WP_329188094.1	hypothetical protein	-
OID55_RS14535 (OID55_14510)	-	3335706..3335978 (-)	273	WP_356072876.1	hypothetical protein	-
OID55_RS14540 (OID55_14515)	clpX	3336191..3337477 (-)	1287	WP_081221566.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OID55_RS14545 (OID55_14520)	clpP	3337638..3338318 (-)	681	WP_081217263.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OID55_RS14550 (OID55_14525)	clpP	3338436..3339041 (-)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OID55_RS14555 (OID55_14530)	tig	3339464..3340849 (-)	1386	WP_164369328.1	trigger factor	-
OID55_RS14570 (OID55_14545)	-	3341579..3341773 (-)	195	WP_016435177.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46912.71 Da
• Isoelectric Point: 4.7360

>NTDB_id=668746 OID55_RS14540 WP_081221566.1 3336191..3337477(-) (clpX) [Streptomyces sp. NBC_00715]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSAGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=668746 OID55_RS14540 WP_081221566.1 3336191..3337477(-) (clpX) [Streptomyces sp. NBC_00715]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGATACGTCGTCGGACAGGAGTCC
GCGAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCGCGGGCCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGACGTGTCCGGTGAGGGTGTCCAGCAGGCCC
TGCTCAAGATCCTCGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGTCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGAGCGTTCGCCGGCCTGGAGAAGCTCATCGAGTCGAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGGAGTCCAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGGCGTCTCCCGGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGAGGCCTGC
GCGCGATCATGGAAGAAGTCCTCCAGGCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTCGTCCTGTCGAACGTCAACCCGACCTTGATCCCCAGGGACGCCCGCCGCGGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521