Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG242_RS13730 Genome accession   NZ_CP108981
Coordinates   3066767..3067891 (+) Length   374 a.a.
NCBI ID   WP_405898444.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00727     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3061767..3072891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG242_RS13715 (OG242_13695) - 3062539..3063315 (+) 777 WP_405901599.1 hypothetical protein -
  OG242_RS13720 (OG242_13700) - 3063329..3065071 (-) 1743 WP_405898442.1 hypothetical protein -
  OG242_RS13725 (OG242_13705) radA/sms 3065207..3066619 (+) 1413 WP_405898443.1 DNA repair protein RadA Machinery gene
  OG242_RS13730 (OG242_13710) disA 3066767..3067891 (+) 1125 WP_405898444.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG242_RS13735 (OG242_13715) - 3067914..3068684 (-) 771 WP_405901600.1 hypothetical protein -
  OG242_RS13740 (OG242_13720) - 3069018..3069920 (+) 903 WP_405898445.1 A/G-specific adenine glycosylase -
  OG242_RS13745 (OG242_13725) - 3070238..3070786 (+) 549 WP_405898446.1 SigE family RNA polymerase sigma factor -
  OG242_RS13750 (OG242_13730) - 3070774..3071493 (+) 720 WP_405898447.1 hypothetical protein -
  OG242_RS13755 (OG242_13735) cseB 3071504..3072208 (+) 705 WP_093708248.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40390.31 Da        Isoelectric Point: 5.0161

>NTDB_id=668436 OG242_RS13730 WP_405898444.1 3066767..3067891(+) (disA) [Streptomyces sp. NBC_00727]
MAASDRAASPGKSGQTTGNEALIRASLSAVAPGMALRDGLERVLRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=668436 OG242_RS13730 WP_405898444.1 3066767..3067891(+) (disA) [Streptomyces sp. NBC_00727]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAACCACGGGTAACGAGGCGCTGATCCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCGTTCTCCGCGGCAACACCGGGGGTCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACACGGCTGCGG
GAGCTCGCCAAGCTCGACGGGGCCCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTGCAACTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGAACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCGACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTGGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTGGAGCTCGGCACCGACGGACGGCTGCTGTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCGGAGCCGACCGCGAAGCGTTCGCGCACGGTGGCGGA
GGCGCTGACCGAGCTGGACTCGCTGACCCACACCGAGCTGCTCGAACTCCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GTTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGGGTCGGCGAGGCCCGGGCGCGCAGCGTGCGCGAGGGCCTGTCCCGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433


Multiple sequence alignment