Detailed information NTG0668425

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG242_RS09545
• Genome accession: NZ_CP108981
• Coordinates: 2137306..2138604 (-)
• Length: 432 a.a.
• NCBI ID: WP_018103185.1
• Uniprot ID: A0ABY6PWL5
• Organism: Streptomyces sp. NBC_00727
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2132306..2143604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG242_RS09535 (OG242_09520)	-	2133434..2136082 (-)	2649	WP_405897733.1	valine--tRNA ligase	-
OG242_RS09540 (OG242_09525)	-	2136222..2137226 (+)	1005	WP_405897734.1	hypothetical protein	-
OG242_RS09545 (OG242_09530)	clpX	2137306..2138604 (-)	1299	WP_018103185.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG242_RS09550 (OG242_09535)	clpP	2138759..2139442 (-)	684	WP_405897735.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG242_RS09555 (OG242_09540)	-	2139521..2140126 (-)	606	WP_191134184.1	ATP-dependent Clp protease proteolytic subunit	-
OG242_RS09560 (OG242_09545)	tig	2140393..2141778 (-)	1386	WP_405897736.1	trigger factor	-
OG242_RS09575 (OG242_09560)	-	2142320..2142514 (-)	195	WP_093708837.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47332.15 Da
• Isoelectric Point: 4.8363

>NTDB_id=668425 OG242_RS09545 WP_018103185.1 2137306..2138604(-) (clpX) [Streptomyces sp. NBC_00727]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDEGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=668425 OG242_RS09545 WP_018103185.1 2137306..2138604(-) (clpX) [Streptomyces sp. NBC_00727]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAAGAGCTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGATACGTCGTAGGCCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGGCGCGGGCCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCGCAACAACGTCAACCCCACCCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGGGCGACGAGGGCCG
CCACGAGAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516