Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   MOW14_RS01095 Genome accession   NZ_CP094258
Coordinates   233794..235362 (-) Length   522 a.a.
NCBI ID   WP_180006911.1    Uniprot ID   -
Organism   Acinetobacter indicus strain BDT201     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 228794..240362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW14_RS01080 (MOW14_01080) gpmI 229610..231157 (+) 1548 WP_005181570.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  MOW14_RS01085 (MOW14_01085) - 231181..232350 (+) 1170 WP_005181572.1 S41 family peptidase -
  MOW14_RS01090 (MOW14_01090) pilR 232367..233776 (-) 1410 WP_104470528.1 sigma-54 dependent transcriptional regulator Regulator
  MOW14_RS01095 (MOW14_01095) pilS 233794..235362 (-) 1569 WP_180006911.1 PAS domain-containing sensor histidine kinase Regulator
  MOW14_RS01100 (MOW14_01100) - 235377..236012 (-) 636 WP_005181577.1 response regulator -
  MOW14_RS01105 (MOW14_01105) - 236230..237312 (+) 1083 WP_127799456.1 serine hydrolase -
  MOW14_RS01110 (MOW14_01110) thrC 237405..238550 (-) 1146 WP_005181581.1 threonine synthase -
  MOW14_RS01115 (MOW14_01115) - 238608..239912 (-) 1305 WP_016659702.1 homoserine dehydrogenase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 60034.72 Da        Isoelectric Point: 7.0194

>NTDB_id=668409 MOW14_RS01095 WP_180006911.1 233794..235362(-) (pilS) [Acinetobacter indicus strain BDT201]
MDIRRTQAELNQYHLGLWYGAYRLIIAFCLLLIYLLTTQTLNHDYQHPRLYAASLVLYFIFSCAQLLYFRYVRHRIPLQL
TLIFSVDVLVLSSLTFALDGPSLHLSLLFVIAIFAATLLLEKSKALFITLVAMICVTYQHFVGTLLDFSSLDRIGQSALL
SFLFFIIYRFGQIAVRRFQILEHLNFSQSLELNRLKNINRYILEQTDMGYLVLDENCHIMVSNPAACHLLGINPLYAFDK
YPLYKVQPDLFQLLQFDQLSNGEKFQFESQLSHFLIQIQVQKLVVPQQTLTLLVLQDARQINQRVQQLKLAALGQLSASI
AHEIRNPLAAIVQANRLLAGSDPDQQQMLSQMIDKQSQRIDKIIDDTLSMVKNKETTPVQIDLVRFIPQLIQDDLADLAS
QIQVSQPEPLQILFDESQLRQVLINLIRNAQRHNAPDHPIELQLYRQQDTIYMDVKDYGSGVASHDIRYLFQPFFSTEIS
GTGLGLYLSHSFCEANRAKLRYVEQKQGACFRIECSPVDVNK

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=668409 MOW14_RS01095 WP_180006911.1 233794..235362(-) (pilS) [Acinetobacter indicus strain BDT201]
ATGGATATCCGCCGTACGCAAGCTGAACTGAACCAGTACCATCTCGGGCTATGGTACGGGGCGTATCGGCTGATAATTGC
CTTCTGTTTGCTGCTGATTTATTTACTCACCACTCAAACTCTCAATCATGATTATCAGCATCCACGGCTGTATGCCGCCA
GTCTGGTGCTGTATTTTATTTTTAGCTGTGCCCAGCTGCTGTATTTTCGCTATGTCCGGCACAGGATTCCGCTACAACTC
ACGCTGATTTTCAGTGTTGATGTACTGGTGCTCAGCAGCCTGACCTTTGCGCTGGATGGACCGAGCCTGCATTTAAGCCT
GCTGTTTGTGATTGCGATTTTCGCCGCGACGTTATTGCTGGAAAAAAGCAAGGCGCTGTTCATTACTCTGGTGGCAATGA
TTTGTGTCACCTATCAGCATTTTGTTGGCACATTACTGGATTTTTCCTCTCTGGATCGCATCGGGCAAAGTGCCCTGCTC
TCGTTCCTGTTTTTTATTATTTACCGTTTTGGCCAGATTGCCGTCCGCCGTTTCCAGATTCTGGAGCACCTGAACTTTTC
CCAATCACTGGAACTGAACCGGCTAAAGAATATTAACCGCTATATTCTGGAACAGACCGATATGGGCTATCTGGTGCTGG
ATGAAAACTGCCATATTATGGTCAGTAATCCGGCCGCCTGCCATTTGCTGGGTATTAATCCGCTGTATGCTTTCGACAAA
TATCCACTGTATAAAGTACAGCCCGACCTGTTTCAATTATTGCAGTTTGACCAGCTCTCTAACGGCGAAAAATTCCAGTT
TGAATCGCAGCTCAGTCATTTCCTGATCCAGATTCAGGTACAAAAGCTGGTGGTGCCGCAGCAGACCTTAACCTTGCTGG
TGCTGCAGGATGCACGGCAAATCAACCAGCGTGTGCAGCAACTGAAACTGGCAGCACTGGGCCAGCTTTCAGCCAGTATT
GCCCATGAAATCCGTAATCCGCTGGCGGCCATTGTCCAGGCCAATCGCTTGCTGGCCGGCAGCGATCCCGATCAGCAGCA
GATGCTGAGCCAGATGATCGACAAGCAGTCGCAGCGCATTGACAAGATCATTGATGACACCCTGAGCATGGTGAAAAATA
AGGAAACCACACCGGTGCAGATTGATCTGGTGCGTTTTATTCCGCAGCTGATCCAGGATGATCTGGCCGATCTGGCCAGC
CAGATTCAGGTCAGCCAGCCCGAACCTCTGCAAATTCTGTTTGATGAATCCCAGCTGCGTCAGGTGCTGATTAACCTGAT
CCGTAATGCCCAGCGCCACAATGCGCCGGATCATCCGATTGAACTGCAACTTTATCGCCAGCAGGACACGATCTATATGG
ATGTCAAAGATTATGGCAGCGGCGTGGCTTCACATGATATTCGCTACCTGTTTCAACCATTTTTTAGTACCGAAATTAGT
GGAACTGGTTTAGGATTATACTTATCACATAGTTTCTGCGAGGCCAATCGGGCCAAGTTGCGCTATGTAGAACAAAAACA
AGGAGCATGTTTCAGGATTGAATGCTCACCTGTTGACGTAAATAAATAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

59.802

96.743

0.579

Multiple sequence alignment