Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilO   Type   Machinery gene
Locus tag   MOW12_RS13510 Genome accession   NZ_CP094254
Coordinates   2812999..2813718 (-) Length   239 a.a.
NCBI ID   WP_127800755.1    Uniprot ID   A0A6C0XYV6
Organism   Acinetobacter indicus strain BDT2076     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2807999..2818718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW12_RS13490 (MOW12_13490) - 2808934..2809926 (-) 993 WP_180036307.1 IS5 family transposase -
  MOW12_RS13495 (MOW12_13495) lpxO 2810329..2811243 (+) 915 WP_125273387.1 lipid A hydroxylase LpxO -
  MOW12_RS13500 (MOW12_13500) - 2811476..2812411 (-) 936 Protein_2608 AMIN domain-containing protein -
  MOW12_RS13505 (MOW12_13505) pilP 2812472..2812999 (-) 528 WP_045795346.1 pilus assembly protein PilP Machinery gene
  MOW12_RS13510 (MOW12_13510) pilO 2812999..2813718 (-) 720 WP_127800755.1 type 4a pilus biogenesis protein PilO Machinery gene
  MOW12_RS13515 (MOW12_13515) pilN 2813715..2814350 (-) 636 WP_005180516.1 PilN domain-containing protein Machinery gene
  MOW12_RS13520 (MOW12_13520) pilM 2814350..2815408 (-) 1059 WP_075174946.1 pilus assembly protein PilM Machinery gene
  MOW12_RS13525 (MOW12_13525) - 2815510..2816261 (+) 752 WP_099046172.1 IS5 family transposase -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 27057.68 Da        Isoelectric Point: 5.3923

>NTDB_id=668400 MOW12_RS13510 WP_127800755.1 2812999..2813718(-) (pilO) [Acinetobacter indicus strain BDT2076]
MSLGQYEEMNQDPVAAPKKKMTLDRFLQQWNTLDPNNYGSWPFSVKLTIWIFIIILIAFLGYFLAIKPKLDAISNARAQE
QNLLNEFREKDSKLRNLQQYQAQLQEMEANFNQQLQQLPKETEIPGLVEDVNVTGVNSGLRFKNIRLENEIKQEFFIEQP
ISIEATGDYHAFGSFVSGTAALPRIVTMHDFTITAGENKEKKTDIPQITYVAKAKTYRYVGNTDAQAGNSTTPATGAAQ

Nucleotide


Download         Length: 720 bp        

>NTDB_id=668400 MOW12_RS13510 WP_127800755.1 2812999..2813718(-) (pilO) [Acinetobacter indicus strain BDT2076]
ATGAGTCTCGGTCAATATGAAGAAATGAATCAGGATCCTGTTGCTGCGCCAAAGAAAAAAATGACGCTGGATAGATTCCT
GCAGCAATGGAATACCTTAGATCCGAATAACTATGGCAGCTGGCCGTTTTCCGTCAAGCTGACCATCTGGATCTTTATTA
TTATTTTAATTGCCTTCCTGGGCTATTTCCTGGCCATCAAGCCGAAGCTGGATGCAATTTCCAATGCGCGTGCACAAGAG
CAGAACCTGCTGAATGAGTTTCGTGAAAAAGATTCCAAACTGCGTAACTTGCAGCAATATCAGGCGCAGTTACAGGAAAT
GGAAGCCAACTTTAACCAGCAGCTACAACAGTTGCCAAAAGAAACCGAAATTCCAGGTCTGGTTGAAGATGTCAACGTTA
CGGGCGTGAATTCAGGCTTAAGATTTAAAAATATCCGTCTGGAAAATGAAATCAAGCAAGAGTTCTTTATCGAGCAGCCA
ATTTCGATTGAAGCCACCGGTGATTATCATGCTTTTGGTTCTTTTGTGAGCGGTACAGCCGCTTTACCGCGAATTGTGAC
CATGCATGATTTCACTATTACTGCCGGTGAAAACAAGGAAAAGAAAACCGATATTCCACAAATTACCTATGTCGCGAAAG
CCAAGACCTATCGCTATGTCGGGAATACCGATGCACAGGCCGGTAATAGTACGACTCCAGCCACAGGAGCAGCACAATGA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilO (PilO)

(74-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6C0XYV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilO Acinetobacter baumannii D1279779

68.908

99.582

0.686
  comO Acinetobacter baylyi ADP1

66.393

100

0.678

Multiple sequence alignment