Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MOW12_RS10935 Genome accession   NZ_CP094254
Coordinates   2286542..2291038 (-) Length   1498 a.a.
NCBI ID   WP_242911830.1    Uniprot ID   -
Organism   Acinetobacter indicus strain BDT2076     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2281542..2296038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW12_RS10905 (MOW12_10905) - 2281847..2282236 (-) 390 WP_075167111.1 YbaN family protein -
  MOW12_RS10910 (MOW12_10910) - 2282327..2283229 (+) 903 WP_168381879.1 DUF1853 family protein -
  MOW12_RS10915 (MOW12_10915) - 2283330..2283476 (+) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  MOW12_RS10920 (MOW12_10920) dapE 2283603..2284736 (+) 1134 WP_005179534.1 succinyl-diaminopimelate desuccinylase -
  MOW12_RS10925 (MOW12_10925) - 2284870..2286021 (+) 1152 WP_005176703.1 IS4-like element ISAbe18 family transposase -
  MOW12_RS10930 (MOW12_10930) - 2286084..2286545 (-) 462 WP_075167114.1 hypothetical protein -
  MOW12_RS10935 (MOW12_10935) chpA 2286542..2291038 (-) 4497 WP_242911830.1 Hpt domain-containing protein Regulator
  MOW12_RS10940 (MOW12_10940) - 2291195..2293267 (-) 2073 WP_168381881.1 methyl-accepting chemotaxis protein -
  MOW12_RS10945 (MOW12_10945) - 2293313..2293849 (-) 537 WP_005179538.1 chemotaxis protein CheW -
  MOW12_RS10950 (MOW12_10950) - 2293853..2294221 (-) 369 WP_005179539.1 response regulator -
  MOW12_RS10955 (MOW12_10955) pilG 2294238..2294621 (-) 384 WP_005179541.1 twitching motility response regulator PilG Regulator

Sequence


Protein


Download         Length: 1498 a.a.        Molecular weight: 166996.44 Da        Isoelectric Point: 4.2897

>NTDB_id=668391 MOW12_RS10935 WP_242911830.1 2286542..2291038(-) (chpA) [Acinetobacter indicus strain BDT2076]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLTSSDSITGLEFDTASTDEQVAADTELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLVHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSSETDTTEAVTETVEA
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MITASHIGLIAHHLETIYERIINRQMNASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVVAEATSSADVQQSDAAALEFELEQPAPAETAYAAPEDEQQPDTSSEPVLEDAPTLAEQTIPTDAVSTTENDGEDN
LHSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNS
NAYDALLNTTVVWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNTTDLLAPSKTFEFVQGDGAEPPSMQGEWSE
TAQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHS
RYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRI
VRQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIALNIGRQGTDVLISFT
DDGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKG
TTFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLS
NIAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKH
VMEPREVQRRDTRHLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTTLVR
RHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4497 bp        

>NTDB_id=668391 MOW12_RS10935 WP_242911830.1 2286542..2291038(-) (chpA) [Acinetobacter indicus strain BDT2076]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGTATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGCCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCCCAGCCGATGGCACTGGACC
TGCGTCCATTGGTGCTGTTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCTTTAGAAGAGCTGTTACAACTG
GCAAGCAGCTTAACATCCAGCGACAGTATTACCGGTCTAGAGTTTGATACAGCAAGCACTGATGAGCAGGTTGCTGCAGA
CACCGAGCTAGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACGGTGGATCGCTTCCTGGTACACGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTAGAAAACCTGTT
CAAGACCCTGTTACAGGATGAAATTGAATCGACTTCCAAAGAAACCGCACTGTTATTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTATTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACTTTCAATACTGCATGGCAGAAC
TATGGCTTTAGCCTGGAAGATGTTGATGAATCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGTGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGACAAGCCAAGCCTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGGCAACGCGTCAGCTTAAGCGAAGATGCCCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCTCAGAAACTGATACCACAGAAGCTGTCACCGAAACGGTTGAAGCC
GGTGCCGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGATAGCGCTGAGGCCAACAA
GGACTTTGATCCAGACTTGCTGGACATTTTCCTGGAAGAAGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAATA
GCTGGAGCCAAGACCCGAGCAATACTGCTGCACTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGCGCCAAC
ATGATTACAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAAATGAA
TGCATCAACCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTAGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGTGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCAGCTGCACTTGAATTTGAGTT
GGAACAGCCAGCACCTGCAGAAACAGCCTATGCTGCGCCTGAAGATGAGCAGCAGCCAGACACCAGCAGCGAACCGGTAC
TGGAAGATGCACCGACTCTGGCCGAGCAAACCATCCCTACAGATGCGGTATCTACTACTGAAAATGACGGTGAAGACAAT
CTGCATTCGATTGTGGAAGAAACCTTCCTGGAAGAGGCTGAAGAGCTGCTCGACACCACGGAAAGCCTGTTAAAGCAGTG
GTTTGACCATCGTAGTGACCGGAGCATTTTGCTGCAGTTACAACGTGCGGCGCACAGCCTGAAAGGCGGCGCGCGTATGG
CTGAAATCGAGCCGGTGGCTGTGATTGCCTATCAGCTGGAAAATACCTTTGAACAGTTTGCGGTGCATCAGTTTAATTCC
AATGCTTATGATGCCTTGCTCAACACCACTGTGGTCTGGTTAAAAGAAGCCATCTTCCAGCGTGATTACAGCAATTTTGA
CAGCCTGAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCACAGCTGCCAGAACGCTTTAATACCACCGATC
TGCTGGCGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAA
ACCGCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGA
AAACGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTA
AACGTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCA
CGCTATACCGACTTCGACCCGCTGGAGATGGACCAGTACTCCTCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGC
GTCGGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCCGAAGGTCTGTTACTGCAACAATCGCGGA
TTCAGGCAGAAATTCAGGAAAGCCTGATGCGCACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATT
GTGCGTCAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACCAT
TCTGGAACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGCCTGGAAGATGCCGCTGTACGTA
AACAGGCAGCGAAGCCGGAAGTGGGCCAGATTGCGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACC
GATGATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAGCAGCT
GGACAAGAAAGAAATCCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAAGCCGTGACCCAGATTTCAGGTCGTG
GCGTCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGC
ACCACCTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCCTGATGGTAAAAGTTGGCGATCAGCAGTTCGC
GATTCCATTGGCGCAAATTGACCGTATTGTACGAATTTCGCCTTCTGCACTGGAAAGTTACTTCAGCAGCAAAGATGATT
ACTTCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTCGCCAATCAGCCATTGCCGCGTTTAAGC
AATATCGCACATTCATTGCCGGTGCTGCTGATTAAAGGCAATACCGGTCAGACCATTGCCTTACTGGTCGATCAGCTGAT
TGGTTCACGTGGCCAGATTGTGATGAAACCGATTGGCCAGCAGTTTTCCAGCGTGGGCTCGATTGCCGGCGCGACCATTC
TTGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCAACCCAGCGCATCAAGCAT
GTGATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCATCTGGTAATGATTGTGGATGACTCGGTGACCGTACGTAA
GGTCACGTCACGTCTGCTCGAGCGTCAGGGCTTTGATGTGGTCACAGCCAAAGACGGTGTCGATGCGATTGAGCAGCTTG
AAAATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGACGGCTTTGAGGTGACCACCCTGGTACGC
CGCCATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGTGAACGTGCCTTTAG
CTTGGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCA
GTGAGGCTAAAGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.867

100

0.619


Multiple sequence alignment