Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | MOW12_RS06640 | Genome accession | NZ_CP094254 |
| Coordinates | 1388960..1389331 (+) | Length | 123 a.a. |
| NCBI ID | WP_227554686.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain BDT2076 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1383960..1394331
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MOW12_RS06610 (MOW12_06610) | kdsB | 1384686..1385450 (+) | 765 | WP_104488987.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| MOW12_RS06615 (MOW12_06615) | - | 1385459..1386442 (+) | 984 | WP_075166783.1 | DNA polymerase III subunit delta' | - |
| MOW12_RS06620 (MOW12_06620) | - | 1386454..1386795 (+) | 342 | WP_005177501.1 | PilZ domain-containing protein | - |
| MOW12_RS06625 (MOW12_06625) | - | 1386825..1387598 (+) | 774 | WP_005177502.1 | TatD family hydrolase | - |
| MOW12_RS06630 (MOW12_06630) | - | 1387658..1388272 (+) | 615 | WP_016658223.1 | TetR/AcrR family transcriptional regulator | - |
| MOW12_RS06635 (MOW12_06635) | - | 1388278..1388850 (+) | 573 | WP_127799398.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| MOW12_RS06640 (MOW12_06640) | xcpV | 1388960..1389331 (+) | 372 | WP_227554686.1 | type II secretion system protein | Machinery gene |
| MOW12_RS06645 (MOW12_06645) | xcpW | 1389328..1389963 (+) | 636 | WP_104472233.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| MOW12_RS06650 (MOW12_06650) | gspK | 1389984..1390943 (+) | 960 | WP_171457073.1 | type II secretion system minor pseudopilin GspK | - |
| MOW12_RS06655 (MOW12_06655) | - | 1391091..1391687 (+) | 597 | WP_005177512.1 | 6-carboxytetrahydropterin synthase | - |
| MOW12_RS06660 (MOW12_06660) | ung | 1391729..1392442 (+) | 714 | WP_005177514.1 | uracil-DNA glycosylase | - |
| MOW12_RS06665 (MOW12_06665) | - | 1392439..1393563 (+) | 1125 | WP_005177517.1 | enoyl-CoA hydratase/isomerase family protein | - |
| MOW12_RS06670 (MOW12_06670) | tadA | 1393567..1394088 (+) | 522 | WP_127799402.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13662.55 Da Isoelectric Point: 4.9612
>NTDB_id=668387 MOW12_RS06640 WP_227554686.1 1388960..1389331(+) (xcpV) [Acinetobacter indicus strain BDT2076]
MAGFTLLEVMVALAIFATAAMALTQVAMQYTQSTSHAILRTKAQFVALNEQALMEIQQDWLTGTQSKQVTQQDENWQIDK
SAQPTISPNVQRVEVQVSLFNPDTGQVEAGITHLVFFNHRVAQ
MAGFTLLEVMVALAIFATAAMALTQVAMQYTQSTSHAILRTKAQFVALNEQALMEIQQDWLTGTQSKQVTQQDENWQIDK
SAQPTISPNVQRVEVQVSLFNPDTGQVEAGITHLVFFNHRVAQ
Nucleotide
Download Length: 372 bp
>NTDB_id=668387 MOW12_RS06640 WP_227554686.1 1388960..1389331(+) (xcpV) [Acinetobacter indicus strain BDT2076]
ATTGCCGGTTTTACCTTATTAGAAGTGATGGTGGCACTGGCGATTTTCGCTACAGCTGCCATGGCACTGACCCAAGTGGC
CATGCAATATACCCAGTCCACCTCTCATGCCATTTTAAGAACCAAAGCGCAGTTTGTGGCCTTAAACGAACAGGCTCTAA
TGGAAATCCAGCAGGACTGGCTGACGGGTACGCAATCAAAACAGGTCACCCAGCAAGATGAAAACTGGCAAATTGATAAA
AGTGCACAGCCGACCATTAGCCCGAATGTGCAGCGGGTAGAAGTGCAGGTCAGCTTATTTAACCCCGATACCGGCCAGGT
GGAAGCTGGCATCACCCATTTGGTGTTTTTTAATCATCGGGTGGCGCAATGA
ATTGCCGGTTTTACCTTATTAGAAGTGATGGTGGCACTGGCGATTTTCGCTACAGCTGCCATGGCACTGACCCAAGTGGC
CATGCAATATACCCAGTCCACCTCTCATGCCATTTTAAGAACCAAAGCGCAGTTTGTGGCCTTAAACGAACAGGCTCTAA
TGGAAATCCAGCAGGACTGGCTGACGGGTACGCAATCAAAACAGGTCACCCAGCAAGATGAAAACTGGCAAATTGATAAA
AGTGCACAGCCGACCATTAGCCCGAATGTGCAGCGGGTAGAAGTGCAGGTCAGCTTATTTAACCCCGATACCGGCCAGGT
GGAAGCTGGCATCACCCATTTGGTGTTTTTTAATCATCGGGTGGCGCAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
77.311 |
96.748 |
0.748 |