Detailed information    

insolico Bioinformatically predicted

Overview

Name   recC   Type   Machinery gene
Locus tag   MON37_RS02910 Genome accession   NZ_CP094242
Coordinates   637324..640551 (-) Length   1075 a.a.
NCBI ID   WP_039407933.1    Uniprot ID   -
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 632324..645551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS02895 (MON37_02895) - 632678..633445 (+) 768 WP_039407957.1 M48 family metallopeptidase -
  MON37_RS02900 (MON37_02900) - 633543..633782 (+) 240 WP_039407938.1 DUF333 domain-containing protein -
  MON37_RS02905 (MON37_02905) - 633956..636718 (-) 2763 WP_039407935.1 TonB-dependent receptor -
  MON37_RS02910 (MON37_02910) recC 637324..640551 (-) 3228 WP_039407933.1 exodeoxyribonuclease V subunit gamma Machinery gene
  MON37_RS02915 (MON37_02915) - 640892..642733 (-) 1842 WP_039407930.1 PglL family O-oligosaccharyltransferase -
  MON37_RS02920 (MON37_02920) - 642733..643092 (-) 360 WP_039407927.1 DUF2069 domain-containing protein -
  MON37_RS02925 (MON37_02925) - 643229..643879 (-) 651 WP_039407924.1 oxygen-insensitive NAD(P)H-dependent nitroreductase NfsB -
  MON37_RS02935 (MON37_02935) - 644240..644734 (-) 495 WP_039407921.1 hypothetical protein -
  MON37_RS02940 (MON37_02940) - 644835..645308 (-) 474 WP_039407918.1 hemerythrin domain-containing protein -

Sequence

Protein


Download         Length: 1075 a.a.        Molecular weight: 122192.28 Da        Isoelectric Point: 4.8782

>NTDB_id=668342 MON37_RS02910 WP_039407933.1 637324..640551(-) (recC) [Morococcus cerebrosus strain CIP 81.93]
MFYLYQSNRLESLAALFAGIQRVRPLESALAAEQIVVQSQGMRRYLSVYLARELGVAANLQFSLPAGLTWQLMQKLIPDI
PALSPFSPEVMRWRLLDLFRSERFQTASEFENVRSVLQSYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQEGKLLG
LGDDEVWQAQLWRYLDDGNQSAPHRVALWEKLLSSLDKAHLPERFFVFGISTMAPMYLQLLQKISEHCDVFVFALNPSGQ
YWGNVIEAAQLLKGGDDADLSQTGHPLLASLGKQGRDFFDFLTEIGLEEQPVFEEVSDDTLLHCLQNDIQNLRMPYHGQA
THSEHSRADLLGDGSIRIVSAHSPLRELQILKDKLLRILHEHPDWQPHDIAVLTPNIEPYSPFIEAVFGQAQGGAQALPY
SVSDVKLSRRQPLLYALEQTLDLLESRFEVDKVLPLLESGLVLRRFGLTADDLPLLHDTIAELNVHWGLDGTMRGAADNL
FTWQQALERIVLGWMLPDDGSPLWQNVSAWHGDVNRLDVFGRFAAFIRTLSSIAAEWRKPAAAEEWTERCRDLVQSLFLP
DADDQYALQQFEQALAKWQEETALAGFRGTLPQHTVIRHIRRFLGSESQAGFLRGGITFCSMVPMRSLPFKVICLLGLND
GDFPRNTKAAVFDLIAKHPQKGDRARRDDDRYLFLEAIISARDILYLSYVGRSIRNDDELAPSALVSELIDTIAAMTGRR
SKELAEHWVEQHPLQPFSHRYFIADKISDDLFSTRQDYADALNRPREQARPFFSEALEENSPAPTVWQDDFIRFWKNPVK
AWLQQTLGWREPYRDEAWESAEPFEPQRADKIAAAYLDARRHNQDFQETAVRLDAESLLPAGELGKLWQQNFQAAAKRID
GALLQSPKLPPFAYEIQFDGQTLQGSLGNLYQCGQVFYLDRKPNAPQRIALLLEHLIFCAVGSSETETRQTHIVQPEETT
LYPEIPSNHAQQMLQKWLTFFNLGQTRPLPFFAKTNLAAAEAYGKKQNWEDALNKAKENYHGNKVSKGQKDYTEVALVFG
NEDTEPVEGALFQRLVEELLIPLLDAVKEESSDAT

Nucleotide


Download         Length: 3228 bp        

>NTDB_id=668342 MON37_RS02910 WP_039407933.1 637324..640551(-) (recC) [Morococcus cerebrosus strain CIP 81.93]
ATGTTCTACCTCTACCAGTCCAACCGCCTCGAATCGCTAGCCGCCCTGTTTGCCGGAATCCAAAGGGTCAGGCCGCTTGA
GTCTGCTTTGGCGGCGGAACAGATTGTGGTACAGAGTCAGGGGATGCGGCGTTATTTGAGCGTGTATCTGGCGCGCGAAC
TAGGGGTGGCGGCGAATTTGCAATTCAGCCTGCCGGCGGGTTTGACGTGGCAGTTGATGCAGAAGCTGATTCCCGATATT
CCCGCGCTCAGTCCGTTTTCGCCGGAGGTGATGCGCTGGCGGCTTTTGGATTTGTTCCGCAGCGAGCGTTTTCAGACGGC
CTCTGAGTTTGAAAACGTCCGTTCTGTCTTGCAAAGCTATTTGGGCAGCGGCGAGTCGGCGGATTATCAGTTGGCGGGGC
AGTTGGCGGATATTTTCGACCAGTATCTGGTGTACCGACCGCAGTGGATTGATGCCTGGCAGGAAGGTAAACTTCTGGGG
CTGGGCGACGACGAGGTCTGGCAGGCGCAGCTTTGGCGCTATTTGGACGATGGCAACCAATCCGCGCCGCACCGTGTGGC
GTTGTGGGAAAAGCTGCTGTCGTCTTTGGATAAGGCGCACCTGCCCGAGCGGTTTTTCGTGTTCGGCATTTCGACGATGG
CGCCGATGTATTTGCAGCTTTTGCAGAAAATTTCGGAACATTGCGATGTGTTTGTGTTCGCACTTAATCCGAGCGGGCAG
TATTGGGGCAATGTGATTGAGGCGGCGCAGCTTTTGAAGGGCGGCGACGATGCGGATTTGTCGCAGACGGGGCATCCGCT
GTTGGCATCGCTGGGCAAGCAGGGGCGTGATTTTTTTGATTTTCTGACAGAAATCGGCTTGGAGGAGCAGCCTGTGTTTG
AAGAAGTTTCAGACGACACGCTGCTGCACTGCCTGCAAAACGATATTCAAAACCTGCGAATGCCGTACCACGGGCAGGCT
ACGCACTCTGAACACAGCCGCGCGGATTTGCTGGGCGACGGCTCCATCCGTATCGTGTCGGCACACAGCCCCCTGCGCGA
ATTGCAGATTTTGAAAGACAAACTGTTGCGGATTCTGCACGAACATCCCGATTGGCAGCCGCACGATATTGCTGTTTTGA
CGCCGAACATCGAGCCGTACAGCCCGTTTATCGAAGCGGTGTTCGGGCAGGCGCAGGGCGGCGCGCAGGCTTTGCCGTAT
TCGGTGTCGGACGTGAAACTCAGCCGCCGCCAGCCGCTGCTTTACGCGCTGGAGCAGACGCTGGATTTGCTGGAAAGCCG
GTTTGAAGTCGATAAAGTGCTGCCGCTGTTGGAAAGCGGTTTGGTGCTGCGCCGTTTCGGGCTGACGGCGGACGACTTGC
CGCTGCTGCACGACACCATTGCCGAATTGAACGTGCATTGGGGGTTGGACGGAACGATGCGCGGCGCGGCGGACAATCTG
TTCACCTGGCAGCAGGCGTTGGAACGCATCGTGTTGGGTTGGATGCTGCCCGACGACGGCAGCCCGCTTTGGCAAAACGT
CAGCGCGTGGCACGGCGATGTCAACCGCCTTGATGTGTTCGGCCGCTTTGCCGCCTTCATCCGCACGCTGTCGAGCATCG
CCGCCGAGTGGCGCAAACCCGCAGCGGCGGAGGAATGGACGGAACGCTGCCGCGATTTGGTGCAGTCGCTGTTCCTGCCC
GACGCCGACGACCAATACGCCTTGCAGCAGTTCGAGCAGGCGTTGGCAAAATGGCAGGAAGAAACCGCGTTGGCAGGCTT
TCGCGGTACTTTGCCGCAACACACGGTCATCCGCCACATACGCCGCTTCTTAGGCAGCGAAAGCCAAGCAGGATTCCTGC
GCGGTGGCATCACCTTTTGCAGCATGGTGCCGATGAGGAGCCTGCCGTTTAAAGTCATCTGTCTGTTGGGGCTGAACGAC
GGCGATTTCCCGCGCAACACCAAAGCAGCCGTGTTCGACCTGATTGCCAAACACCCGCAAAAAGGCGACCGCGCCCGCCG
CGACGACGACCGCTACCTCTTCCTCGAAGCCATCATCAGCGCGCGCGACATCCTTTATCTCTCCTACGTCGGCCGCAGCA
TCCGCAACGACGACGAACTCGCCCCGTCCGCCCTCGTCAGCGAACTCATCGACACCATCGCCGCCATGACCGGACGGCGC
AGCAAAGAACTGGCGGAACACTGGGTCGAACAACATCCCCTGCAACCGTTCTCACACCGCTATTTCATCGCAGACAAAAT
TTCAGACGACCTCTTCAGCACGCGGCAGGACTACGCCGACGCCCTCAACCGCCCGCGCGAACAGGCGCGTCCGTTTTTCA
GCGAAGCCCTCGAAGAAAACAGCCCTGCACCGACCGTCTGGCAGGACGACTTCATCCGCTTCTGGAAAAATCCCGTCAAA
GCATGGCTGCAACAAACCTTAGGCTGGCGCGAACCCTACCGCGACGAAGCATGGGAATCCGCCGAACCCTTCGAACCGCA
ACGCGCCGACAAAATCGCCGCCGCCTACCTTGACGCCCGCCGCCACAACCAAGACTTTCAAGAAACCGCCGTCCGCCTCG
ACGCCGAAAGCCTGTTGCCCGCCGGTGAACTGGGTAAATTGTGGCAGCAGAATTTCCAAGCCGCCGCCAAACGTATAGAC
GGCGCATTGCTGCAAAGCCCCAAACTGCCGCCCTTCGCCTACGAAATCCAGTTCGACGGACAAACCCTGCAAGGCAGCCT
CGGCAACCTGTACCAATGCGGACAAGTGTTCTACCTCGACCGCAAACCCAACGCCCCGCAACGCATCGCCCTCCTGCTCG
AACATTTAATCTTTTGCGCGGTAGGGTCGTCTGAAACCGAAACCCGCCAAACCCATATCGTTCAGCCTGAAGAAACAACG
CTTTATCCCGAAATCCCTAGCAACCACGCGCAACAAATGCTGCAAAAATGGTTGACGTTCTTCAACCTCGGACAAACGCG
CCCGCTGCCTTTCTTCGCCAAAACCAACCTCGCCGCCGCCGAAGCCTACGGCAAAAAACAGAACTGGGAAGATGCCTTGA
ACAAAGCCAAGGAAAACTATCACGGCAACAAAGTCAGCAAAGGGCAAAAAGACTATACAGAAGTCGCCTTAGTGTTCGGC
AACGAAGATACCGAGCCGGTAGAAGGAGCGTTGTTCCAAAGATTGGTGGAAGAGCTGCTGATACCGCTGCTGGACGCGGT
AAAGGAAGAATCGTCGGATGCGACATAG

Domains

Predicted by InterproScan.

RecC C-terminal domain (RecC_C)

(786-1002)

Exodeoxyribonuclease V, gamma subunit (Exonuc_V_gamma)

(2-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recC Neisseria gonorrhoeae strain FA1090

72.491

100

0.726

Multiple sequence alignment