Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   MON40_RS01385 Genome accession   NZ_CP094241
Coordinates   283592..284290 (+) Length   232 a.a.
NCBI ID   WP_003780094.1    Uniprot ID   A0AA36UGH2
Organism   Neisseria macacae ATCC 33926     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 278592..289290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON40_RS01355 (MON40_01355) - 278789..280240 (+) 1452 WP_141765189.1 23S rRNA methyltransferase -
  MON40_RS01360 (MON40_01360) - 280261..281361 (+) 1101 WP_039863269.1 alpha-glucan phosphorylase -
  MON40_RS01365 (MON40_01365) - 281374..281910 (+) 537 WP_003760398.1 ATP/GTP-binding protein -
  MON40_RS01370 (MON40_01370) - 281912..282565 (+) 654 WP_009313121.1 hypothetical protein -
  MON40_RS01375 (MON40_01375) - 282596..282955 (+) 360 WP_003760395.1 roadblock/LC7 domain-containing protein -
  MON40_RS01385 (MON40_01385) dsbA1 283592..284290 (+) 699 WP_003780094.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  MON40_RS01390 (MON40_01390) obgE 284484..285638 (+) 1155 WP_039863259.1 GTPase ObgE -
  MON40_RS01395 (MON40_01395) - 285718..285906 (+) 189 WP_003763141.1 hypothetical protein -
  MON40_RS01400 (MON40_01400) - 285887..286501 (+) 615 WP_003780098.1 zeta toxin family protein -
  MON40_RS01405 (MON40_01405) - 286600..287043 (+) 444 WP_003780099.1 restriction endonuclease -
  MON40_RS01410 (MON40_01410) cysS 287076..288497 (+) 1422 WP_003780103.1 cysteine--tRNA ligase -
  MON40_RS01415 (MON40_01415) - 288581..289102 (-) 522 WP_039863261.1 DapH/DapD/GlmU-related protein -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25345.07 Da        Isoelectric Point: 6.0254

>NTDB_id=668290 MON40_RS01385 WP_003780094.1 283592..284290(+) (dsbA1) [Neisseria macacae ATCC 33926]
MKLKTLTLATALLALTACDNKVQTSVPADSAPAASAASAAPVALVEGLNYTTLSTPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHVKTFKDDTYLRTEHVVWGDEMKPLARLAAAVDMAVADTKDIANSHIFDAMVNQKVKLQDPETLKKWLAEQTA
FDGKKVLAAYESPESQTRADKMAELTNTYKIDGTPTVIVGGKYKVEFADWESGMKTIDLLADKVREEQKTAK

Nucleotide


Download         Length: 699 bp        

>NTDB_id=668290 MON40_RS01385 WP_003780094.1 283592..284290(+) (dsbA1) [Neisseria macacae ATCC 33926]
ATGAAACTGAAAACCCTTACCCTTGCTACTGCTCTGCTGGCCCTGACCGCCTGCGACAACAAAGTCCAAACCAGCGTCCC
CGCCGACAGTGCGCCTGCGGCTTCAGCAGCCTCCGCTGCGCCTGTCGCTTTAGTTGAGGGGCTTAACTACACCACACTCA
GCACCCCCATTCCTCAGCAGCAGGCAGGTAAAGTCGAAGTCCTCGAATTTTTCGGCTACTTCTGTCCGCACTGCGCCCAC
CTCGAACCCGTTTTGAGCAAACACGTCAAAACCTTTAAAGACGACACCTACCTTCGTACTGAACACGTTGTTTGGGGTGA
TGAGATGAAACCGTTGGCGCGCCTTGCTGCCGCCGTCGATATGGCGGTCGCAGACACCAAAGACATTGCAAACAGCCATA
TCTTTGATGCTATGGTTAATCAGAAAGTCAAACTGCAAGACCCTGAAACCCTCAAAAAATGGTTGGCCGAGCAAACCGCT
TTTGACGGCAAAAAAGTCCTCGCCGCCTACGAATCCCCTGAAAGCCAAACCCGCGCAGACAAAATGGCAGAGCTGACCAA
TACCTACAAAATCGACGGCACGCCTACCGTCATTGTCGGCGGCAAATACAAAGTCGAATTTGCCGACTGGGAATCAGGTA
TGAAAACCATAGACCTGCTTGCAGACAAAGTACGCGAAGAACAAAAAACTGCCAAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(63-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

82.403

100

0.828
  dsbA2 Neisseria meningitidis MC58

76.887

91.379

0.703

Multiple sequence alignment