Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   MP387_RS07870 Genome accession   NZ_CP094226
Coordinates   1621203..1622963 (-) Length   586 a.a.
NCBI ID   WP_242746128.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1616203..1627963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS07830 (MP387_07830) - 1616362..1616556 (-) 195 WP_000709170.1 hypothetical protein -
  MP387_RS07835 (MP387_07835) - 1616553..1616759 (-) 207 WP_242746118.1 hypothetical protein -
  MP387_RS07840 (MP387_07840) - 1616883..1618550 (-) 1668 WP_242746121.1 DAK2 domain-containing protein -
  MP387_RS07845 (MP387_07845) - 1618553..1618918 (-) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  MP387_RS07850 (MP387_07850) rpmB 1619071..1619259 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  MP387_RS07855 (MP387_07855) - 1619364..1620038 (-) 675 WP_242746123.1 hypothetical protein -
  MP387_RS07860 (MP387_07860) - 1620043..1620489 (-) 447 WP_000776592.1 LytTR family DNA-binding domain-containing protein -
  MP387_RS07865 (MP387_07865) - 1620603..1621106 (-) 504 WP_242746126.1 phosphatase PAP2 family protein -
  MP387_RS07870 (MP387_07870) rcrQ 1621203..1622963 (-) 1761 WP_242746128.1 ABC transporter ATP-binding protein Regulator
  MP387_RS07875 (MP387_07875) rcrP 1622953..1624722 (-) 1770 WP_242746131.1 ABC transporter ATP-binding protein Regulator
  MP387_RS07880 (MP387_07880) - 1624706..1625167 (-) 462 WP_242746133.1 MarR family winged helix-turn-helix transcriptional regulator -
  MP387_RS07885 (MP387_07885) - 1625382..1626065 (+) 684 WP_242746135.1 CD20-like domain-containing protein -
  MP387_RS07890 (MP387_07890) - 1626115..1626831 (-) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64441.17 Da        Isoelectric Point: 5.3108

>NTDB_id=668122 MP387_RS07870 WP_242746128.1 1621203..1622963(-) (rcrQ) [Streptococcus oralis strain 1648]
MENKKVSVWKQCKPYMAGLQLPLLVAVIAAVCSSIITVYGPTKSKEITNLISDGLMTGIDLEAVSSIASFLVILYVLGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDCHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQSNLAAVNGYVEEMYSGHNVVTSYNAVDTSKAKFAGLNQNLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKDRQLNNMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTGISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMNQAGFYADLYNSQFTEDQAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=668122 MP387_RS07870 WP_242746128.1 1621203..1622963(-) (rcrQ) [Streptococcus oralis strain 1648]
ATGGAAAATAAAAAAGTTTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTTCCCCTACTCGTAGCGGT
TATCGCAGCTGTATGTTCTAGTATCATTACGGTTTATGGGCCGACCAAGAGTAAGGAAATTACCAACTTGATTTCAGATG
GTTTGATGACGGGAATTGATCTAGAGGCTGTTTCAAGTATTGCTAGCTTTTTAGTGATTCTCTACGTACTTGGGGCTATC
CTTAACTATACACAGGCCTATATCTTTTCAACAAGTATCCAACATTTTTCAAAACGCTTGCGGACAGCAATCGCTGAAAA
GATCAATCGTTTGCCCCTTGGCTATTTTGACTGTCATTCGCAAGGGGACACTCTATCTCGTGTGACCAATGATGTGGATA
CAGCAGCGCAATCTCTCAACCAAAGTCTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTGGCATTGGTAACAGTTGTATCAACCCTTGTTGGTTTTGCGGCGGTTTCCGTAATCATGGC
TAAGTCACAGGGTTATTTTAAAGCCCAACAAAGTAATCTAGCAGCCGTCAATGGTTATGTAGAAGAAATGTATTCGGGAC
ACAATGTTGTAACGAGCTACAACGCAGTAGACACCTCTAAAGCGAAATTTGCAGGTTTGAATCAGAACTTGCACGACAGC
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAATTTTAGCTATGTTTTGGTCAT
CATCGTTGGGGCCGCGCTTGCTCTAGAAGGGCATATCACGATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCCTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTTTGGCTGAAGCAGAGATGCAAGATGAATCTCATAAGGACAGACAATTGAACAACATGAAAGGGGAAGTGGTTTTTGA
TCACGTGTCCTTTGGCTATACACCAGAGCGCACCATCATCCATGACTTTTCTGCGACAGCTCATGCAGGTCAGAAGGTCG
CGATTGTTGGACCGACTGGGGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATAGATAAGGGAAGT
ATCCGCATCGATGGTGTGGATACCAAGGATATGAAGCGTTCGGAAGTACACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAAGGAACGATTCGAGAGAATTTGATCTATAATCAGACAGGTATCAGCGATGAGCGAATGATGGAAGCTA
GTAAGGCTGTGGGAATCCATCATTTTATCATGACCTTACCAGACGGCTACGATACCGTCTTGGACGATACAGTTACCCTG
TCTGTCGGACAAAAACAACTCTTAACCATTGCTCGTGCTCTGCTGAAGGATGCACCGCTCTTGATTTTGGATGAAGCGAC
ATCCTCAGTTGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAGGGTAGAACCTCCTTTGTCA
TCGCCCACCGCTTGTCAACTATTCGTAATGCCGACTTGATTCTTGTCATGAAAGATGGCAATATCATCGAACAAGGCAAT
CATGAGGAATTGATGAACCAAGCTGGCTTCTATGCAGATCTCTACAATAGTCAATTTACAGAAGACCAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.781

99.659

0.666

Multiple sequence alignment