Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MP387_RS07875 Genome accession   NZ_CP094226
Coordinates   1622953..1624722 (-) Length   589 a.a.
NCBI ID   WP_242746131.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1617953..1629722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS07845 (MP387_07845) - 1618553..1618918 (-) 366 WP_000216434.1 Asp23/Gls24 family envelope stress response protein -
  MP387_RS07850 (MP387_07850) rpmB 1619071..1619259 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  MP387_RS07855 (MP387_07855) - 1619364..1620038 (-) 675 WP_242746123.1 hypothetical protein -
  MP387_RS07860 (MP387_07860) - 1620043..1620489 (-) 447 WP_000776592.1 LytTR family DNA-binding domain-containing protein -
  MP387_RS07865 (MP387_07865) - 1620603..1621106 (-) 504 WP_242746126.1 phosphatase PAP2 family protein -
  MP387_RS07870 (MP387_07870) rcrQ 1621203..1622963 (-) 1761 WP_242746128.1 ABC transporter ATP-binding protein Regulator
  MP387_RS07875 (MP387_07875) rcrP 1622953..1624722 (-) 1770 WP_242746131.1 ABC transporter ATP-binding protein Regulator
  MP387_RS07880 (MP387_07880) - 1624706..1625167 (-) 462 WP_242746133.1 MarR family winged helix-turn-helix transcriptional regulator -
  MP387_RS07885 (MP387_07885) - 1625382..1626065 (+) 684 WP_242746135.1 CD20-like domain-containing protein -
  MP387_RS07890 (MP387_07890) - 1626115..1626831 (-) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  MP387_RS07895 (MP387_07895) - 1626928..1628298 (-) 1371 WP_242746137.1 MATE family efflux transporter -
  MP387_RS07900 (MP387_07900) - 1628408..1628962 (+) 555 WP_242746140.1 GNAT family N-acetyltransferase -
  MP387_RS07905 (MP387_07905) - 1629094..1629288 (-) 195 WP_000415531.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65431.74 Da        Isoelectric Point: 6.1999

>NTDB_id=668123 MP387_RS07875 WP_242746131.1 1622953..1624722(-) (rcrP) [Streptococcus oralis strain 1648]
MKKLAKRITGKEWGMIVLTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPATKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRTDVFHRVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAENYQDEKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLTLAIYWIGAYLINDASLTDRLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
PSIENPSHAQTADPSVQGQVEFRDVTFRYSQNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLIPRFYDVSSGQILV
DGVDVQDYNLEELRNKVGYIPQKAVLFSGDVKGNLDFGKSQESPLSEPAMWQALELAQSRSFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQELAQKTQSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=668123 MP387_RS07875 WP_242746131.1 1622953..1624722(-) (rcrP) [Streptococcus oralis strain 1648]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGAATGATCGTCCTTACGATTCTGTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTGCCGACTTATATTTCGCAAATTACAGAATTACTAGGAACGTCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTACGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCCGCT
CGCGTTGCAGCATCCTATACAACTCATCTACGCACTGACGTATTTCATCGTGTTTTAGATTTTTCGCAGACAGAGATCAA
GCGCTTTTCAATCCCAAGTCTTTTGACTCGGACGACCAATGATATTACCCAGGTACAGATGCTCTTTACCATGGGCTTAC
AAGTGGTTACTCGTGGGCCGATTATGGCTATCTGGGCCATTGGAAAAATCCTTGGAAAATCAGAATACTGGCTCTGGGCG
GTCGTTGTGGCTGTTATTGTCAATGTCTTGATGACCACCGTTCTCATGACTCTGGCCTTTCCAAAACAATCGGTCATCCA
AAAATTGACAGATAAGCTCAATAGCATCACTCGTGAAAGTTTGACAGGGATTCGGGTTGTTCGTGCTTATAATGCTGAGA
ATTACCAAGATGAAAAATTTGAAGCAGCCAACGATGAGGTGACACGTCTCAACCTTTTTGTCAACCGTTTGATGGCGATT
ATGAATCCTATTATGATGGCGATTTCCAGCGGTTTGACCTTAGCTATTTATTGGATTGGAGCCTATCTGATCAACGATGC
TAGTTTGACCGACCGTTTGCCACTCTTTAGTGATATGGTGGTCTTTATGTCCTATGCCATGCAGGTCGTGATGGGATTCC
TACTCATGGGGGCACTCTTTATCGTTCTTCCTCGTACCTTGGTTTCTGCAGGACGTATCAACCAAGTTTTGGATTTGCAT
CCTTCTATTGAGAATCCGAGTCATGCACAGACAGCGGATCCTTCAGTTCAAGGACAAGTTGAATTCCGTGACGTAACCTT
CCGCTACTCTCAAAACTCAGAAGCAGTTGTGGAACATGTTACTTTTAAAGCCGAAGCAGGTCAAACAGTTGCTTTTATCG
GATCAACTGGATCTGGGAAATCTACTCTAGTCAACCTAATACCTCGTTTTTATGATGTCTCATCTGGTCAAATCCTAGTA
GATGGTGTCGATGTGCAAGATTACAACTTGGAAGAGCTGCGTAATAAGGTCGGCTATATTCCACAAAAAGCTGTGCTCTT
TTCTGGAGATGTTAAGGGAAACTTAGACTTTGGTAAGAGTCAAGAAAGTCCTCTCAGTGAACCTGCTATGTGGCAAGCTC
TTGAATTGGCCCAGTCTAGAAGCTTCATCGAGGACAAGGAAGCAGGTCTTGCATCAGAAGTGGCTCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAACGCTTGGCTATTGCCCGGGCCTTGGCTCGTAAGCCAGAGATTCTCATCTTTGATGACTC
TTTCTCAGCCTTGGACTACAAGACAGACCGGATCTTGCGCCAAGAACTTGCTCAAAAAACACAATCCATGACCAAACTCA
TCGTAGCGCAACGGATTTCTACCATCATGGATGCCGACCTGATCTTGGTTTTGGATCAAGGAAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCTACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

64.892

100

0.662

Multiple sequence alignment