Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MP387_RS05285 Genome accession   NZ_CP094226
Coordinates   1084686..1086488 (-) Length   600 a.a.
NCBI ID   WP_242745560.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1079686..1091488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS05270 (MP387_05270) - 1081550..1082773 (-) 1224 WP_216728409.1 FtsW/RodA/SpoVE family cell cycle protein -
  MP387_RS05275 (MP387_05275) prsA 1082962..1083903 (-) 942 WP_000728083.1 peptidylprolyl isomerase PrsA -
  MP387_RS05280 (MP387_05280) - 1083971..1084684 (-) 714 WP_242745558.1 O-methyltransferase -
  MP387_RS05285 (MP387_05285) pepF 1084686..1086488 (-) 1803 WP_242745560.1 oligoendopeptidase F Regulator
  MP387_RS05290 (MP387_05290) coiA 1086507..1087463 (-) 957 WP_242745561.1 competence protein CoiA family protein Machinery gene
  MP387_RS05295 (MP387_05295) - 1087540..1088688 (-) 1149 WP_242745563.1 hypothetical protein -
  MP387_RS05300 (MP387_05300) tehB 1088866..1089726 (-) 861 WP_242745566.1 SAM-dependent methyltransferase TehB -
  MP387_RS05305 (MP387_05305) smpB 1089741..1090208 (-) 468 WP_001051742.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69905.92 Da        Isoelectric Point: 4.6209

>NTDB_id=668107 MP387_RS05285 WP_242745560.1 1084686..1086488(-) (pepF) [Streptococcus oralis strain 1648]
MVLQRYEINEKDTWDLSTIYPTDQAWEEALKDLTEKVQTASQYEGHLLDSADSLLEITEFSLDLERQVEKLYVYAHMKND
QDTREAKYQEYYAKAMTLYSQLEQAFSFYEPEFMEIREEQYAVFLEAQPKLQVYKHFFDKLLQKKDHVLSQREEELLAGA
GEIFGAASETFAILDNADISFPYVLDDEGKEVQLSHGTYIRLMESKNREVRRGAYEALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANFVPESVYDNLVAAVRKHLPLLHRYLNLRSKILGISDLKMYDVYTPLSSVEYSFTYEEALK
KAEEALAVLGDDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPQIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
NVMRKAGVDMEKEDYLNDAFAVFERRLNEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=668107 MP387_RS05285 WP_242745560.1 1084686..1086488(-) (pepF) [Streptococcus oralis strain 1648]
ATGGTATTACAACGATATGAAATAAATGAAAAAGATACATGGGATCTTTCAACGATCTACCCAACAGACCAGGCTTGGGA
AGAAGCCTTGAAAGATTTAACTGAAAAAGTACAAACAGCATCTCAGTATGAGGGACATCTCTTGGACAGCGCAGACAGTT
TGCTTGAGATCACAGAATTCTCACTCGACTTGGAACGCCAAGTTGAAAAGCTTTATGTCTATGCGCATATGAAAAATGAC
CAGGACACGCGTGAAGCCAAGTATCAAGAGTACTATGCTAAGGCAATGACCCTATACAGTCAGTTAGAACAAGCCTTTTC
ATTCTATGAACCTGAGTTTATGGAGATTAGGGAAGAGCAGTATGCGGTCTTCCTAGAAGCTCAACCAAAACTCCAAGTTT
ACAAACACTTTTTTGACAAGCTCTTGCAGAAGAAAGACCATGTTCTTTCGCAACGTGAGGAAGAATTACTTGCTGGAGCA
GGAGAAATTTTTGGCGCTGCTAGTGAAACCTTCGCTATTTTGGACAATGCGGATATTAGCTTCCCATACGTGCTTGATGA
CGAAGGCAAGGAAGTACAACTCTCACACGGTACTTACATCCGCTTGATGGAGTCTAAAAACCGTGAAGTGCGCCGTGGTG
CCTATGAAGCCCTTTATGCGACATATGAGCAATTCCAACACACTTATGCTAAGACCTTGCAGACAAATGTTAAGGTGCAA
AACTACCGTGCTAAAGTTCGCAACTATAAGAGTGCCCGCCATGCAGCCCTCGCAGCCAATTTTGTTCCAGAAAGTGTCTA
TGACAATCTAGTAGCAGCAGTTCGCAAGCACTTGCCACTCTTGCATCGATATCTTAACCTTCGTTCTAAAATCTTGGGTA
TTTCTGATCTCAAGATGTACGATGTCTACACACCGCTATCTTCAGTAGAATACAGCTTTACTTATGAGGAAGCCTTGAAA
AAGGCAGAAGAAGCTTTGGCGGTTTTAGGTGACGACTACTTGAGCCGTGTTAAACGTGCCTTCAGTGAGCGTTGGATTGA
TGTCTATGAAAACCAAGGCAAGCGTTCTGGTGCCTACTCTGGTGGTTCTTACGATACCAATGCCTTTATGCTTCTCAACT
GGCAGGACAATCTAGATAATCTCTTTACCCTTGTCCATGAGACAGGTCACAGTATGCACTCCAGCTATACTCGTGAAACC
CAACCTTATGTTTACGGAGATTATTCTATCTTCTTGGCTGAGATTGCCTCAACGACTAACGAAAATATCTTGACAGAGAA
ATTGTTGGAAGAAGTAGAAGACGATGCGACTCGTTTTGCAATTCTCAATAACTTCCTAGACGGTTTCCGTGGAACAGTCT
TCCGTCAAACTCAATTCGCTGAGTTTGAACATGCCATCCACCAAGCAGATCAAAATGGAGAAGTCTTGACAAGTGATTTC
CTCAATAAGCTCTACGCTGACTTGAACCAAGAGTACTATGGACTCAGCAAGGAAGACAATCCTCAAATCCAATATGAGTG
GGCACGCATTCCTCACTTCTACTATAACTACTATGTTTATCAGTATTCAACAGGTTTTGCAGCTGCTTCAGCCTTGGCTG
AAAAGATTGTCCATGGTAGTCAGGAAGACCGTGACCGTTATATCGACTACCTCAAGGCTGGTAAGTCTGACTATCCGCTT
AATGTCATGAGAAAAGCGGGAGTGGATATGGAGAAGGAAGACTATCTCAACGACGCCTTTGCAGTCTTTGAACGCCGTTT
AAATGAGTTTGAAGCCCTTGTTGAAAAATTGGGACTGGCTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.617

99.333

0.672

Multiple sequence alignment