Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   MP387_RS04340 Genome accession   NZ_CP094226
Coordinates   882653..883462 (+) Length   269 a.a.
NCBI ID   WP_242747945.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 877653..888462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS04320 (MP387_04320) pta 878310..879284 (+) 975 WP_242747941.1 phosphate acetyltransferase -
  MP387_RS04325 (MP387_04325) mutY 879367..880545 (+) 1179 WP_242747943.1 A/G-specific adenine glycosylase -
  MP387_RS04330 (MP387_04330) micA 880602..881309 (+) 708 WP_000722058.1 response regulator YycF Regulator
  MP387_RS04335 (MP387_04335) micB 881302..882651 (+) 1350 WP_061413994.1 cell wall metabolism sensor histidine kinase VicK Regulator
  MP387_RS04340 (MP387_04340) vicX 882653..883462 (+) 810 WP_242747945.1 MBL fold metallo-hydrolase Regulator
  MP387_RS04345 (MP387_04345) - 883550..884350 (+) 801 Protein_807 ion transporter -
  MP387_RS04350 (MP387_04350) - 884360..884707 (-) 348 WP_242747947.1 thioredoxin -
  MP387_RS04355 (MP387_04355) - 884818..886536 (-) 1719 WP_242747949.1 phospho-sugar mutase -
  MP387_RS04360 (MP387_04360) - 886945..888099 (+) 1155 WP_242747950.1 DUF4352 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29947.00 Da        Isoelectric Point: 6.3426

>NTDB_id=668105 MP387_RS04340 WP_242747945.1 882653..883462(+) (vicX) [Streptococcus oralis strain 1648]
MSEIGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWRAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRAMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=668105 MP387_RS04340 WP_242747945.1 882653..883462(+) (vicX) [Streptococcus oralis strain 1648]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATCCTAGTGGATGCAGGCCTGTCTGGTAAGAAGATTACCAGCCTACTAGCTGAAATCAATCGTAAACCTGAAGATC
TGGATGCAATCTTGATTACGCATGAGCATTCAGACCATATCCACGGAGTCGGTGTCTTGGCTCGCAAATATGGTATGGAT
CTTTACGCCAATGAAAAGACTTGGCGGGCTATGGAAAATAGTAAGTACCTCGGCAAGGTTGATTCTTCACAAAAGCATAT
CTTTGAAATGGGCAAAACCAAAACCTTTGGCGATATCGACATTGAGAGTTTTGGTGTTAGCCATGATGCAGTAGCACCCC
AGTTTTACCGATTTATGAAAGACGACAAGAGCTTCGTCATGTTGACCGATACAGGTTATGTCAGTGACCGTATGGCTGGG
ATTGTCGAAAATGCTGACGGTTATCTCATCGAGTCCAACCACGACGTAGAAATCTTGCGAGCAGGATCTTATGCTTGGCG
ACTCAAACAACGAATCCTATCGGATCTCGGTCACCTTTCCAACGAGGACGGTGCTGAAGCCATGATTCGTGCAATGGGAA
ATCGGACTAAGAAAATCTATCTTGGGCATTTATCCAAAGAGAACAATATCAAGGAGCTGGCTCATATGACTATGGTCAAT
CAGTTAGCCCAGGCTGATCTGGGAGTCGGAGTAGACTTTAAGGTTTATGATACCTCACCAGATACTGCAACACCATTAAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77

Multiple sequence alignment