Detailed information NTG0668069

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIC43_RS29085
• Genome accession: NZ_CP108876
• Coordinates: 6467777..6469075 (+)
• Length: 432 a.a.
• NCBI ID: WP_072483632.1
• Uniprot ID: A0A1K1UXB1
• Organism: Streptomyces sp. NBC_00825
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6462777..6474075

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIC43_RS29055 (OIC43_29045)	-	6463740..6463934 (+)	195	WP_124717718.1	hypothetical protein	-
OIC43_RS29070 (OIC43_29060)	tig	6464581..6465987 (+)	1407	WP_266690909.1	trigger factor	-
OIC43_RS29075 (OIC43_29065)	-	6466253..6466858 (+)	606	WP_164495234.1	ATP-dependent Clp protease proteolytic subunit	-
OIC43_RS29080 (OIC43_29070)	clpP	6466936..6467619 (+)	684	WP_124717721.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIC43_RS29085 (OIC43_29075)	clpX	6467777..6469075 (+)	1299	WP_072483632.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIC43_RS29090 (OIC43_29080)	-	6469137..6470177 (-)	1041	WP_266690911.1	hypothetical protein	-
OIC43_RS29095 (OIC43_29085)	-	6470318..6472939 (+)	2622	WP_266690913.1	valine--tRNA ligase	-
OIC43_RS29100 (OIC43_29090)	-	6473010..6473462 (-)	453	WP_241196339.1	hypothetical protein	-
OIC43_RS29105 (OIC43_29095)	-	6473501..6473983 (-)	483	WP_266690914.1	response regulator	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47229.03 Da
• Isoelectric Point: 4.8824

>NTDB_id=668069 OIC43_RS29085 WP_072483632.1 6467777..6469075(+) (clpX) [Streptomyces sp. NBC_00825]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=668069 OIC43_RS29085 WP_072483632.1 6467777..6469075(+) (clpX) [Streptomyces sp. NBC_00825]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGTAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAAGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCGAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGGGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCCGACGTCGTCCGCAACAACGTGAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGGCGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

3D structure

• AlphaFold DB: A0A1K1UXB1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509