Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG60_RS00290 | Genome accession | NZ_CP094177 |
| Coordinates | 64087..64662 (+) | Length | 191 a.a. |
| NCBI ID | WP_245084702.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe062 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59087..69662
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG60_RS00265 (MPG60_00265) | uvrD | 59778..61823 (+) | 2046 | WP_245084692.1 | DNA helicase UvrD | - |
| MPG60_RS00270 (MPG60_00270) | flgA | 61820..62476 (+) | 657 | WP_245084695.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG60_RS00275 (MPG60_00275) | - | 62486..63049 (+) | 564 | WP_154421381.1 | UbiX family flavin prenyltransferase | - |
| MPG60_RS00280 (MPG60_00280) | coaD | 63049..63522 (+) | 474 | WP_001169261.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG60_RS00285 (MPG60_00285) | tmk | 63524..64099 (+) | 576 | WP_245084699.1 | dTMP kinase | - |
| MPG60_RS00290 (MPG60_00290) | comFC | 64087..64662 (+) | 576 | WP_245084702.1 | ComF family protein | Machinery gene |
| MPG60_RS00295 (MPG60_00295) | - | 64695..66735 (+) | 2041 | Protein_56 | N-6 DNA methylase | - |
| MPG60_RS00300 (MPG60_00300) | - | 66732..67418 (+) | 687 | WP_245084705.1 | restriction endonuclease subunit S | - |
| MPG60_RS00305 (MPG60_00305) | - | 67445..68008 (+) | 564 | WP_245084708.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21355.97 Da Isoelectric Point: 9.4455
>NTDB_id=668028 MPG60_RS00290 WP_245084702.1 64087..64662(+) (comFC) [Helicobacter pylori strain Hpfe062]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=668028 MPG60_RS00290 WP_245084702.1 64087..64662(+) (comFC) [Helicobacter pylori strain Hpfe062]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCTATTGATGATAAAATCAAATCCTTTTACTCGCATTCGGCCGCACTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCATATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCTATTGATGATAAAATCAAATCCTTTTACTCGCATTCGGCCGCACTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCATATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |