Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG23_RS00265 | Genome accession | NZ_CP094172 |
| Coordinates | 60660..61235 (+) | Length | 191 a.a. |
| NCBI ID | WP_180587199.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe0002 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55660..66235
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG23_RS00240 (MPG23_00240) | uvrD | 56351..58396 (+) | 2046 | WP_245088530.1 | DNA helicase UvrD | - |
| MPG23_RS00245 (MPG23_00245) | flgA | 58393..59049 (+) | 657 | WP_245088532.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG23_RS00250 (MPG23_00250) | - | 59059..59622 (+) | 564 | WP_245088534.1 | UbiX family flavin prenyltransferase | - |
| MPG23_RS00255 (MPG23_00255) | coaD | 59622..60095 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG23_RS00260 (MPG23_00260) | tmk | 60097..60672 (+) | 576 | WP_245034244.1 | dTMP kinase | - |
| MPG23_RS00265 (MPG23_00265) | comFC | 60660..61235 (+) | 576 | WP_180587199.1 | ComF family protein | Machinery gene |
| MPG23_RS00270 (MPG23_00270) | - | 61268..63307 (+) | 2040 | WP_245088536.1 | N-6 DNA methylase | - |
| MPG23_RS00275 (MPG23_00275) | - | 63304..63930 (+) | 627 | WP_245088538.1 | restriction endonuclease subunit S | - |
| MPG23_RS00280 (MPG23_00280) | - | 63899..64519 (+) | 621 | WP_245088540.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21306.86 Da Isoelectric Point: 8.8864
>NTDB_id=667959 MPG23_RS00265 WP_180587199.1 60660..61235(+) (comFC) [Helicobacter pylori strain Hpfe0002]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667959 MPG23_RS00265 WP_180587199.1 60660..61235(+) (comFC) [Helicobacter pylori strain Hpfe0002]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCACTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCCAATAATGCTGTTTCGTATGCCGGGAAAAGCCTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCACTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCCAATAATGCTGTTTCGTATGCCGGGAAAAGCCTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
96.859 |
100 |
0.969 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
35.938 |
100 |
0.361 |