Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG20_RS00290 | Genome accession | NZ_CP094171 |
| Coordinates | 63750..64325 (+) | Length | 191 a.a. |
| NCBI ID | WP_245074312.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe0003 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58750..69325
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG20_RS00265 (MPG20_00265) | uvrD | 59441..61486 (+) | 2046 | WP_245074306.1 | DNA helicase UvrD | - |
| MPG20_RS00270 (MPG20_00270) | flgA | 61483..62139 (+) | 657 | WP_245074308.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG20_RS00275 (MPG20_00275) | - | 62149..62712 (+) | 564 | WP_000780125.1 | UbiX family flavin prenyltransferase | - |
| MPG20_RS00280 (MPG20_00280) | coaD | 62712..63185 (+) | 474 | WP_220833375.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG20_RS00285 (MPG20_00285) | tmk | 63187..63762 (+) | 576 | WP_245074310.1 | dTMP kinase | - |
| MPG20_RS00290 (MPG20_00290) | comFC | 63750..64325 (+) | 576 | WP_245074312.1 | ComF family protein | Machinery gene |
| MPG20_RS00295 (MPG20_00295) | - | 64358..66397 (+) | 2040 | WP_245074314.1 | N-6 DNA methylase | - |
| MPG20_RS00300 (MPG20_00300) | - | 66442..66999 (+) | 558 | Protein_57 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21323.93 Da Isoelectric Point: 9.0901
>NTDB_id=667939 MPG20_RS00290 WP_245074312.1 63750..64325(+) (comFC) [Helicobacter pylori strain Hpfe0003]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGTEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGTEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667939 MPG20_RS00290 WP_245074312.1 63750..64325(+) (comFC) [Helicobacter pylori strain Hpfe0003]
ATGCGCTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATATG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCACGGAGTTTGTGAAAATCCTAAAAGAGAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCATTTTGCGATCGCACTTTG
CAGCGCGGATGAATGA
ATGCGCTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATATG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCACGGAGTTTGTGAAAATCCTAAAAGAGAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTACTAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCATTTTGCGATCGCACTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |